RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 USP48Q86UV5 1035 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 TTC5Q8N0Z6 440 aa8.73□□□□□ -1.01
SDCBP-203ENST00000424270 ADAMTS7Q9UKP4 1686 aa8.72□□□□□ -1.01
SDCBP-203ENST00000424270 ANKRD26Q9UPS8 1709 aa8.72□□□□□ -1.01
SDCBP-203ENST00000424270 TCERG1O14776 1098 aaKnown RBP8.72□□□□□ -1.01
SDCBP-203ENST00000424270 EIF4A2Q14240 407 aaKnown RBP8.72□□□□□ -1.01
SDCBP-203ENST00000424270 FBXO46Q6PJ61 603 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-203ENST00000424270 C7orf43Q8WVR3 580 aa8.72□□□□□ -1.01
SDCBP-203ENST00000424270 GBA2Q9HCG7 927 aaPredicted RBP8.72□□□□□ -1.01
SDCBP-203ENST00000424270 GPRC5DQ9NZD1 345 aa8.72□□□□□ -1.01
SDCBP-203ENST00000424270 ZNF296Q8WUU4 475 aaPredicted RBP8.71□□□□□ -1.02
SDCBP-203ENST00000424270 PSMD1Q99460 953 aa8.71□□□□□ -1.02
SDCBP-203ENST00000424270 KIF20BQ96Q89 1820 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 PPIP5K2O43314 1243 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 TBC1D8O95759 1140 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 GMPSP49915 693 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-203ENST00000424270 EIF5P55010 431 aaKnown RBP8.7□□□□□ -1.02
SDCBP-203ENST00000424270 REM2Q8IYK8 340 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-203ENST00000424270 CSRNP1Q96S65 589 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 ZNF652Q9Y2D9 606 aa8.7□□□□□ -1.02
SDCBP-203ENST00000424270 FAM155AB1AL88 458 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-203ENST00000424270 H7C1D1 291 aa8.69□□□□□ -1.02
SDCBP-203ENST00000424270 CC2D2BQ6DHV5 1058 aa8.69□□□□□ -1.02
SDCBP-203ENST00000424270 TPTE2Q6XPS3 522 aa8.69□□□□□ -1.02
SDCBP-203ENST00000424270 KRT26Q7Z3Y9 468 aa8.69□□□□□ -1.02
SDCBP-203ENST00000424270 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
SDCBP-203ENST00000424270 RPGRQ92834 1020 aaKnown RBP8.69□□□□□ -1.02
SDCBP-203ENST00000424270 SIN3AQ96ST3 1273 aa8.69□□□□□ -1.02
SDCBP-203ENST00000424270 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
SDCBP-203ENST00000424270 ARFGEF2Q9Y6D5 1785 aa8.68□□□□□ -1.02
SDCBP-203ENST00000424270 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
SDCBP-203ENST00000424270 INTS3Q68E01 1043 aaKnown RBP8.68□□□□□ -1.02
SDCBP-203ENST00000424270 DLK2Q6UY11 383 aa8.68□□□□□ -1.02
SDCBP-203ENST00000424270 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
SDCBP-203ENST00000424270 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
SDCBP-203ENST00000424270 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
SDCBP-203ENST00000424270 SLC10A3P09131 477 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 TNIP1Q15025 636 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 AOC3Q16853 763 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 POLKQ9UBT6 870 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
SDCBP-203ENST00000424270 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 ADM5C9JUS6 153 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 FKTNO75072 461 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 RAD17O75943 681 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 CAMTA2O94983 1202 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 IL6STP40189 918 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 MNX1P50219 401 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 RBM26Q5T8P6 1007 aaKnown RBP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 SULT6B1Q6IMI4 303 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 TMEM106CQ9BVX2 250 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 CNOT7Q9UIV1 285 aaKnown RBP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 ZNRF3Q9ULT6 936 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 NIP7Q9Y221 180 aaKnown RBP eCLIP8.66□□□□□ -1.02
SDCBP-203ENST00000424270 AKAP11Q9UKA4 1901 aa8.66□□□□□ -1.02
SDCBP-203ENST00000424270 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 H0YGN5 161 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 GPR25O00155 361 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-203ENST00000424270 EN2P19622 333 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-203ENST00000424270 HIRAP54198 1017 aaPredicted RBP8.65□□□□□ -1.02
SDCBP-203ENST00000424270 CXCL9Q07325 125 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 MICALL2Q8IY33 904 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 PGAP2Q9UHJ9 254 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 TRIM17Q9Y577 477 aa8.65□□□□□ -1.02
SDCBP-203ENST00000424270 CDHR2Q9BYE9 1310 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 PITPNM2Q9BZ72 1349 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
SDCBP-203ENST00000424270 MKRN3Q13064 507 aaKnown RBP8.64□□□□□ -1.03
SDCBP-203ENST00000424270 TTLL12Q14166 644 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-203ENST00000424270 TBC1D10BQ4KMP7 808 aaPredicted RBP8.64□□□□□ -1.03
SDCBP-203ENST00000424270 CDCA8Q53HL2 280 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 RASAL3Q86YV0 1011 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 COL4A5P29400 1685 aa8.64□□□□□ -1.03
SDCBP-203ENST00000424270 A1BGP04217 495 aa8.63□□□□□ -1.03
SDCBP-203ENST00000424270 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
SDCBP-203ENST00000424270 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
SDCBP-203ENST00000424270 DPF3Q92784 378 aa8.63□□□□□ -1.03
SDCBP-203ENST00000424270 RBM17Q96I25 401 aaKnown RBP8.63□□□□□ -1.03
SDCBP-203ENST00000424270 TESK2Q96S53 571 aa8.63□□□□□ -1.03
SDCBP-203ENST00000424270 SHTN1A0MZ66 631 aa8.62□□□□□ -1.03
SDCBP-203ENST00000424270 KLRG2A4D1S0 409 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-203ENST00000424270 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-203ENST00000424270 TEFQ10587 303 aa8.62□□□□□ -1.03
SDCBP-203ENST00000424270 POLR3GLQ9BT43 218 aa8.62□□□□□ -1.03
SDCBP-203ENST00000424270 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
SDCBP-203ENST00000424270 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-203ENST00000424270 SREBF2Q12772 1141 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 CLEC4GQ6UXB4 293 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 DPP8Q6V1X1 898 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-203ENST00000424270 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms