RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SLC4A9Q96Q91 983 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 DIAPH3Q9NSV4 1193 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 GPTP24298 496 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 CASP7P55210 303 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 FAM89AQ96GI7 184 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 ATG3Q9NT62 314 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
SNCA-206ENST00000420646 MRC1P22897 1456 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 TIMM10P62072 90 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 IL27Q8NEV9 243 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 FOXO4P98177 505 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 ACSBG1Q96GR2 724 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 DBNDD2Q9BQY9 259 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 LSG1Q9H089 658 aaKnown RBP10.68□□□□□ -0.7
SNCA-206ENST00000420646 PKD1L3Q7Z443 1732 aa10.68□□□□□ -0.7
SNCA-206ENST00000420646 LRRC24Q50LG9 513 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 AOX1Q06278 1338 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 HLFQ16534 295 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 HSPA4P34932 840 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 NMIQ13287 307 aaPredicted RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 PRPF40BQ6NWY9 871 aaKnown RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 CWC25Q9NXE8 425 aaPredicted RBP10.67□□□□□ -0.7
SNCA-206ENST00000420646 SNX14Q9Y5W7 946 aa10.67□□□□□ -0.7
SNCA-206ENST00000420646 GLI3P10071 1580 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 H7C1W4 665 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 MCCP23508 829 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 KIAA1211Q6ZU35 1233 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 TCEANC2Q96MN5 208 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 FSD1Q9BTV5 496 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 HDAC5Q9UQL6 1122 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 ZDHHC9Q9Y397 364 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 TUBGCP6Q96RT7 1819 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 GPATCH3Q96I76 525 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 SEC62Q99442 399 aaKnown RBP10.66□□□□□ -0.7
SNCA-206ENST00000420646 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
SNCA-206ENST00000420646 KCPQ6ZWJ8 1503 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 EXOC5O00471 708 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 RABL6Q3YEC7 729 aaPredicted RBP10.65□□□□□ -0.7
SNCA-206ENST00000420646 DDX46Q7L014 1031 aaKnown RBP10.65□□□□□ -0.7
SNCA-206ENST00000420646 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
SNCA-206ENST00000420646 RAD50Q92878 1312 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
SNCA-206ENST00000420646 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
SNCA-206ENST00000420646 SOCS7O14512 581 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 KCNQ4P56696 695 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 MCTP1Q6DN14 999 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 EVI5LQ96CN4 794 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 BAG4O95429 457 aaKnown RBP10.64□□□□□ -0.71
SNCA-206ENST00000420646 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
SNCA-206ENST00000420646 ATG9AQ7Z3C6 839 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
SNCA-206ENST00000420646 ZBTB1Q9Y2K1 713 aa10.64□□□□□ -0.71
SNCA-206ENST00000420646 ABCA3Q99758 1704 aa10.63□□□□□ -0.71
SNCA-206ENST00000420646 KCNJ4P48050 445 aa10.63□□□□□ -0.71
SNCA-206ENST00000420646 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
SNCA-206ENST00000420646 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
SNCA-206ENST00000420646 AK2P54819 239 aa10.63□□□□□ -0.71
SNCA-206ENST00000420646 ABCC6O95255 1503 aa10.63□□□□□ -0.71
SNCA-206ENST00000420646 LARGE1O95461 756 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 JAKMIP1Q96N16 626 aaKnown RBP10.62□□□□□ -0.71
SNCA-206ENST00000420646 GBP4Q96PP9 640 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 SHANK3Q9BYB0 1731 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 PARP4Q9UKK3 1724 aaKnown RBP10.62□□□□□ -0.71
SNCA-206ENST00000420646 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 SNRKQ9NRH2 765 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 RBM8AQ9Y5S9 174 aaKnown RBP10.62□□□□□ -0.71
SNCA-206ENST00000420646 LTBP4Q8N2S1 1624 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 KCNQ2O43526 872 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 STARD3NLO95772 234 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 NCLP19338 710 aaKnown RBP10.62□□□□□ -0.71
SNCA-206ENST00000420646 ANAPC15P60006 121 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 CCDC191Q8NCU4 936 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
SNCA-206ENST00000420646 AFDNP55196 1824 aaKnown RBP10.61□□□□□ -0.71
SNCA-206ENST00000420646 DDX11L8A8MPP1 907 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 GOLIM4O00461 696 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 CYP19A1P11511 503 aaPredicted RBP10.61□□□□□ -0.71
SNCA-206ENST00000420646 ROBO1Q9Y6N7 1651 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 TNS2Q63HR2 1409 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 COL15A1P39059 1388 aa10.61□□□□□ -0.71
SNCA-206ENST00000420646 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
SNCA-206ENST00000420646 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms