RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 IL17REQ8NFR9 667 aa11.07□□□□□ -0.64
UPF3AP1-201ENST00000413731 CNTNAP1P78357 1384 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 KCNQ3O43525 872 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 ZMYND10O75800 440 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 A1BGP04217 495 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 PDE4AP27815 886 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 IL6STP40189 918 aaPredicted RBP11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 TEFQ10587 303 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
UPF3AP1-201ENST00000413731 DLG5Q8TDM6 1919 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 NUP98P52948 1817 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 GNAT3A8MTJ3 354 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 NPHP1O15259 732 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 SRGNP10124 158 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 ST5P78524 1137 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 IFNL1Q8IU54 200 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 PASKQ96RG2 1323 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
UPF3AP1-201ENST00000413731 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 FOXN1O15353 648 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 DZIP3Q86Y13 1208 aaKnown RBP11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 MASTLQ96GX5 879 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 FMNL2Q96PY5 1086 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 TEX13AQ9BXU3 409 aaPredicted RBP11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
UPF3AP1-201ENST00000413731 KDM3BQ7LBC6 1761 aa11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 LDHDQ86WU2 507 aa11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 TAF1DQ9H5J8 278 aaPredicted RBP11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 COL4A5P29400 1685 aa11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
UPF3AP1-201ENST00000413731 IQCA1LA6NCM1 817 aa11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 CCDC93Q567U6 631 aa11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 SOGA3Q5TF21 947 aa11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 OLFM4Q6UX06 510 aa11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 NBPF5PQ86XG9 351 aaPredicted RBP11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 C7orf43Q8WVR3 580 aa11.02□□□□□ -0.65
UPF3AP1-201ENST00000413731 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 NPM2Q86SE8 214 aaKnown RBP11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 ABCC12Q96J65 1359 aa11.01□□□□□ -0.65
UPF3AP1-201ENST00000413731 VEGFBP49765 207 aa11□□□□□ -0.65
UPF3AP1-201ENST00000413731 FKBP4Q02790 459 aaKnown RBP eCLIP11□□□□□ -0.65
UPF3AP1-201ENST00000413731 EAPPQ56P03 285 aaPredicted RBP11□□□□□ -0.65
UPF3AP1-201ENST00000413731 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
UPF3AP1-201ENST00000413731 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
UPF3AP1-201ENST00000413731 RNF123Q5XPI4 1314 aa11□□□□□ -0.65
UPF3AP1-201ENST00000413731 TMEM88BA6NKF7 163 aa10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 MAP3K13O43283 966 aa10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 NPR1P16066 1061 aa10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 ZNF652Q9Y2D9 606 aa10.99□□□□□ -0.65
UPF3AP1-201ENST00000413731 LAMB2P55268 1798 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 FAM177BA6PVY3 158 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 EPHX2P34913 555 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 MCM10Q7L590 875 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 PRDM10Q9NQV6 1147 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 HACL1Q9UJ83 578 aa10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 NIP7Q9Y221 180 aaKnown RBP eCLIP10.98□□□□□ -0.65
UPF3AP1-201ENST00000413731 KLRG2A4D1S0 409 aaPredicted RBP10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 IARSP41252 1262 aaKnown RBP10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 CTCFP49711 727 aaPredicted RBP10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 DDX10Q13206 875 aaKnown RBP10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 MAP1SQ66K74 1059 aaPredicted RBP10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 SLC51AQ86UW1 340 aa10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 ANKRD36CQ5JPF3 1778 aa10.97□□□□□ -0.65
UPF3AP1-201ENST00000413731 RIC1Q4ADV7 1423 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 FZD9O00144 591 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 SNRPA1P09661 255 aaKnown RBP10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 LBX1P52954 281 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 GOLGA2Q08379 1002 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 DCTN1Q14203 1278 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 MFSD10Q14728 455 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 HLFQ16534 295 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
UPF3AP1-201ENST00000413731 RASSF10A6NK89 507 aa10.95□□□□□ -0.66
UPF3AP1-201ENST00000413731 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
UPF3AP1-201ENST00000413731 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
UPF3AP1-201ENST00000413731 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms