RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 BTG4Q9NY30 223 aa15.73■□□□□ 0.11
LITAF-203ENST00000413364 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
LITAF-203ENST00000413364 G3BP1Q13283 466 aaKnown RBP eCLIP15.71■□□□□ 0.11
LITAF-203ENST00000413364 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
LITAF-203ENST00000413364 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
LITAF-203ENST00000413364 AHDC1Q5TGY3 1603 aaPredicted RBP15.71■□□□□ 0.11
LITAF-203ENST00000413364 EPB41L2O43491 1005 aaKnown RBP15.71■□□□□ 0.11
LITAF-203ENST00000413364 IFIT2P09913 472 aaKnown RBP15.71■□□□□ 0.11
LITAF-203ENST00000413364 CDK11BP21127 795 aaKnown RBP15.71■□□□□ 0.11
LITAF-203ENST00000413364 EPHA10Q5JZY3 1008 aa15.71■□□□□ 0.11
LITAF-203ENST00000413364 GPATCH3Q96I76 525 aa15.71■□□□□ 0.11
LITAF-203ENST00000413364 ECHDC1Q9NTX5 307 aa15.71■□□□□ 0.11
LITAF-203ENST00000413364 MCCP23508 829 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 TOGARAM1Q9Y4F4 1720 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 ST18O60284 1047 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 PTCD1O75127 700 aaKnown RBP15.7■□□□□ 0.1
LITAF-203ENST00000413364 SASH1O94885 1247 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 MAP4K4O95819 1239 aaPredicted RBP15.7■□□□□ 0.1
LITAF-203ENST00000413364 ANO2Q9NQ90 1003 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 TMOD3Q9NYL9 352 aa15.7■□□□□ 0.1
LITAF-203ENST00000413364 AFDNP55196 1824 aaKnown RBP15.7■□□□□ 0.1
LITAF-203ENST00000413364 COL22A1Q8NFW1 1626 aaPredicted RBP15.69■□□□□ 0.1
LITAF-203ENST00000413364 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 AACSQ86V21 672 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 ZSCAN30Q86W11 494 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 A1BGP04217 495 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 MCM4P33991 863 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 ANAPC15P60006 121 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
LITAF-203ENST00000413364 UBE3BQ7Z3V4 1068 aa15.69■□□□□ 0.1
LITAF-203ENST00000413364 AK9Q5TCS8 1911 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 A0A087WZG4 1122 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 CASP7P55210 303 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 IL17RAQ96F46 866 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 TTLL7Q6ZT98 887 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
LITAF-203ENST00000413364 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
LITAF-203ENST00000413364 MSNP26038 577 aaKnown RBP15.67■□□□□ 0.1
LITAF-203ENST00000413364 RFX5P48382 616 aaPredicted RBP15.67■□□□□ 0.1
LITAF-203ENST00000413364 JARID2Q92833 1246 aaPredicted RBP15.67■□□□□ 0.1
LITAF-203ENST00000413364 EAF2Q96CJ1 260 aaPredicted RBP15.67■□□□□ 0.1
LITAF-203ENST00000413364 SGSM2O43147 1006 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 SIL1Q9H173 461 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 IL25Q9H293 177 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
LITAF-203ENST00000413364 COL16A1Q07092 1604 aaPredicted RBP15.66■□□□□ 0.1
LITAF-203ENST00000413364 H7C1W4 665 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 RAB3GAP1Q15042 981 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 KLHDC4Q8TBB5 520 aa15.66■□□□□ 0.1
LITAF-203ENST00000413364 PIGBQ92521 554 aa15.65■□□□□ 0.1
LITAF-203ENST00000413364 PALD1Q9ULE6 856 aa15.65■□□□□ 0.1
LITAF-203ENST00000413364 CCDC173Q0VFZ6 552 aa15.65■□□□□ 0.1
LITAF-203ENST00000413364 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
LITAF-203ENST00000413364 CWC25Q9NXE8 425 aaPredicted RBP15.65■□□□□ 0.1
LITAF-203ENST00000413364 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 PTPN12Q05209 780 aaKnown RBP15.64■□□□□ 0.09
LITAF-203ENST00000413364 EVI5LQ96CN4 794 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 ASAP1Q9ULH1 1129 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 UQCRHLA0A096LP55 91 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 UQCRHP07919 91 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 HSPA4P34932 840 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 NEK4P51957 841 aa15.64■□□□□ 0.09
LITAF-203ENST00000413364 TNPO1Q92973 898 aaKnown RBP15.64■□□□□ 0.09
LITAF-203ENST00000413364 CCDC8Q9H0W5 538 aaPredicted RBP15.64■□□□□ 0.09
LITAF-203ENST00000413364 RAD50Q92878 1312 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 LTBP4Q8N2S1 1624 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 MCM2P49736 904 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 FOXO4P98177 505 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 DIAPH3Q9NSV4 1193 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 ATG3Q9NT62 314 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 BCCIPQ9P287 314 aaKnown RBP eCLIP15.63■□□□□ 0.09
LITAF-203ENST00000413364 VGLL3A8MV65 326 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 TRAK2O60296 914 aa15.63■□□□□ 0.09
LITAF-203ENST00000413364 SECISBP2LQ93073 1101 aaKnown RBP15.63■□□□□ 0.09
LITAF-203ENST00000413364 LSG1Q9H089 658 aaKnown RBP15.63■□□□□ 0.09
LITAF-203ENST00000413364 TLR7Q9NYK1 1049 aaKnown RBP15.63■□□□□ 0.09
LITAF-203ENST00000413364 LRP6O75581 1613 aa15.62■□□□□ 0.09
LITAF-203ENST00000413364 DDX11L8A8MPP1 907 aa15.62■□□□□ 0.09
LITAF-203ENST00000413364 IRX3P78415 501 aaPredicted RBP15.62■□□□□ 0.09
LITAF-203ENST00000413364 SLC20A2Q08357 652 aa15.62■□□□□ 0.09
LITAF-203ENST00000413364 DNTTIP2Q5QJE6 756 aaKnown RBP15.62■□□□□ 0.09
LITAF-203ENST00000413364 LMBR1LQ6UX01 489 aa15.62■□□□□ 0.09
LITAF-203ENST00000413364 CWC27Q6UX04 472 aaKnown RBP15.62■□□□□ 0.09
LITAF-203ENST00000413364 TJP1Q07157 1748 aa15.62■□□□□ 0.09
LITAF-203ENST00000413364 DNAJC10Q8IXB1 793 aa15.61■□□□□ 0.09
LITAF-203ENST00000413364 CWC22Q9HCG8 908 aaKnown RBP15.61■□□□□ 0.09
LITAF-203ENST00000413364 BCL9O00512 1426 aa15.61■□□□□ 0.09
LITAF-203ENST00000413364 GBP4Q96PP9 640 aa15.61■□□□□ 0.09
LITAF-203ENST00000413364 GZF1Q9H116 711 aaPredicted RBP15.61■□□□□ 0.09
LITAF-203ENST00000413364 R3HCC1Q9Y3T6 440 aaKnown RBP15.61■□□□□ 0.09
LITAF-203ENST00000413364 ITGB4P16144 1822 aa15.61■□□□□ 0.09
LITAF-203ENST00000413364 EXOC5O00471 708 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms