RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 TBC1D32Q96NH3 1257 aa13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
RN7SKP228-201ENST00000411042 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 CDC45O75419 566 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 CASP7P55210 303 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 KIF6Q6ZMV9 814 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 C8orf37Q96NL8 207 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 USP21Q9UK80 565 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
RN7SKP228-201ENST00000411042 RREB1Q92766 1687 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 MAP3K15Q6ZN16 1313 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 POTEAQ6S8J7 498 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 CASC1Q6TDU7 716 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
RN7SKP228-201ENST00000411042 TICAM2Q86XR7 235 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 SUCLG2Q96I99 432 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 PLA2G12BQ9BX93 195 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
RN7SKP228-201ENST00000411042 A0A087WZG4 1122 aa12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 MX1P20591 662 aa12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 BICC1Q9H694 974 aaKnown RBP12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 TJP1Q07157 1748 aa12.99□□□□□ -0.33
RN7SKP228-201ENST00000411042 ATRNO75882 1429 aa12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 PCCAP05165 728 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 RBM25P49756 843 aaKnown RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 EIF5P55010 431 aaKnown RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 SIK1P57059 783 aa12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 AK7Q96M32 723 aa12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
RN7SKP228-201ENST00000411042 CDHR2Q9BYE9 1310 aa12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 GSPT1P15170 499 aaKnown RBP12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 FAM98CQ17RN3 349 aaKnown RBP12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 CCDC87Q9NVE4 849 aa12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 SRCAPQ6ZRS2 3230 aa12.97□□□□□ -0.33
RN7SKP228-201ENST00000411042 ERC2O15083 957 aa12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 SMARCA5O60264 1052 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 SEC24BO95487 1268 aa12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 TBC1D9Q6ZT07 1266 aa12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 SYTL4Q96C24 671 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 GPR108Q9NPR9 543 aa12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
RN7SKP228-201ENST00000411042 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 TUBGCP6Q96RT7 1819 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 SDSP20132 328 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 BECN1Q14457 450 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 MEX3CQ5U5Q3 659 aaKnown RBP12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 ZNF772Q68DY9 489 aaPredicted RBP12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
RN7SKP228-201ENST00000411042 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 CIAO1O76071 339 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 REC8O95072 547 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 ATP6V1AP38606 617 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 FOXO4P98177 505 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 INTS5Q6P9B9 1019 aaKnown RBP12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 CLEC4GQ6UXB4 293 aa12.94□□□□□ -0.34
RN7SKP228-201ENST00000411042 AFF2P51816 1311 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 NUP98P52948 1817 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 CSF1RP07333 972 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 PARP10Q53GL7 1025 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 OTUD7AQ8TE49 926 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 ZBTB1Q9Y2K1 713 aa12.93□□□□□ -0.34
RN7SKP228-201ENST00000411042 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms