RNA–Protein interactions for RNA: ENST00000395205.6

BBS4-202, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best) BASIC

Gene BBS4, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-202ENST00000395205 EPHA10Q5JZY3 1008 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.45
BBS4-202ENST00000395205 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
BBS4-202ENST00000395205 FAM89AQ96GI7 184 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 TRMT112Q9UI30 125 aaKnown RBP12.27□□□□□ -0.45
BBS4-202ENST00000395205 EXOC6BQ9Y2D4 811 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 SURF6O75683 361 aaKnown RBP12.27□□□□□ -0.45
BBS4-202ENST00000395205 PCCAP05165 728 aaPredicted RBP12.27□□□□□ -0.45
BBS4-202ENST00000395205 RFC4P35249 363 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 MTX1Q13505 466 aa12.27□□□□□ -0.45
BBS4-202ENST00000395205 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.45
BBS4-202ENST00000395205 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
BBS4-202ENST00000395205 CLEC4GQ6UXB4 293 aa12.26□□□□□ -0.45
BBS4-202ENST00000395205 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
BBS4-202ENST00000395205 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
BBS4-202ENST00000395205 SBF2Q86WG5 1849 aa12.26□□□□□ -0.45
BBS4-202ENST00000395205 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
BBS4-202ENST00000395205 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 SUSD4Q5VX71 490 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 ARFGEF2Q9Y6D5 1785 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
BBS4-202ENST00000395205 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
BBS4-202ENST00000395205 FOXO4P98177 505 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
BBS4-202ENST00000395205 BICDL1Q6ZP65 573 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
BBS4-202ENST00000395205 UTP14AQ9BVJ6 771 aaKnown RBP12.25□□□□□ -0.45
BBS4-202ENST00000395205 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
BBS4-202ENST00000395205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
BBS4-202ENST00000395205 RAB11FIP3O75154 756 aa12.24□□□□□ -0.45
BBS4-202ENST00000395205 PDE4AP27815 886 aa12.24□□□□□ -0.45
BBS4-202ENST00000395205 HSP90AB4PQ58FF6 505 aa12.24□□□□□ -0.45
BBS4-202ENST00000395205 SYNE4Q8N205 404 aa12.24□□□□□ -0.45
BBS4-202ENST00000395205 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
BBS4-202ENST00000395205 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
BBS4-202ENST00000395205 RABL6Q3YEC7 729 aaPredicted RBP12.23□□□□□ -0.45
BBS4-202ENST00000395205 LRRCC1Q9C099 1032 aa12.23□□□□□ -0.45
BBS4-202ENST00000395205 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
BBS4-202ENST00000395205 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
BBS4-202ENST00000395205 TFCP2L1Q9NZI6 479 aa12.23□□□□□ -0.45
BBS4-202ENST00000395205 RGL2O15211 777 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 G3BP1Q13283 466 aaKnown RBP eCLIP12.22□□□□□ -0.45
BBS4-202ENST00000395205 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
BBS4-202ENST00000395205 BCL2L12Q9HB09 334 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 RREB1Q92766 1687 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
BBS4-202ENST00000395205 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
BBS4-202ENST00000395205 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 LY75O60449 1722 aa12.22□□□□□ -0.45
BBS4-202ENST00000395205 MYH14Q7Z406 1995 aaKnown RBP12.22□□□□□ -0.45
BBS4-202ENST00000395205 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 SSFA2P28290 1259 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 EN1Q05925 392 aaPredicted RBP12.21□□□□□ -0.45
BBS4-202ENST00000395205 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.45
BBS4-202ENST00000395205 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 SIL1Q9H173 461 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 USP42Q9H9J4 1324 aaKnown RBP12.21□□□□□ -0.45
BBS4-202ENST00000395205 GTF2E1P29083 439 aaPredicted RBP12.21□□□□□ -0.45
BBS4-202ENST00000395205 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 KIF1BPQ96EK5 621 aa12.21□□□□□ -0.45
BBS4-202ENST00000395205 PDE8AO60658 829 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 HCLS1P14317 486 aaPredicted RBP12.2□□□□□ -0.46
BBS4-202ENST00000395205 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
BBS4-202ENST00000395205 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 NUTM1Q86Y26 1132 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 IL1RAPL2Q9NP60 686 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
BBS4-202ENST00000395205 HSP90B1P14625 803 aaKnown RBP12.2□□□□□ -0.46
BBS4-202ENST00000395205 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
BBS4-202ENST00000395205 NTSR2O95665 410 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 CSF1RP07333 972 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 CTSWP56202 376 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
BBS4-202ENST00000395205 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 COPRSQ9NQ92 184 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 BAG6P46379 1132 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
BBS4-202ENST00000395205 TAF7LQ5H9L4 462 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 NYXQ9GZU5 481 aa12.19□□□□□ -0.46
BBS4-202ENST00000395205 NPHP1O15259 732 aa12.18□□□□□ -0.46
BBS4-202ENST00000395205 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
BBS4-202ENST00000395205 PLEKHM2Q8IWE5 1019 aa12.18□□□□□ -0.46
BBS4-202ENST00000395205 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
BBS4-202ENST00000395205 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
BBS4-202ENST00000395205 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
BBS4-202ENST00000395205 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
BBS4-202ENST00000395205 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
BBS4-202ENST00000395205 TPTE2Q6XPS3 522 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms