RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
PDGFD-202ENST00000393158 TCIRG1Q13488 830 aa13.6□□□□□ -0.23
PDGFD-202ENST00000393158 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
PDGFD-202ENST00000393158 MYO5AQ9Y4I1 1855 aaKnown RBP13.6□□□□□ -0.23
PDGFD-202ENST00000393158 AKAP11Q9UKA4 1901 aa13.59□□□□□ -0.23
PDGFD-202ENST00000393158 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
PDGFD-202ENST00000393158 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
PDGFD-202ENST00000393158 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
PDGFD-202ENST00000393158 CHMP4AQ9BY43 222 aa13.59□□□□□ -0.23
PDGFD-202ENST00000393158 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
PDGFD-202ENST00000393158 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.23
PDGFD-202ENST00000393158 PLSCR1O15162 318 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 GNAI2P04899 355 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 NLRP10Q86W26 655 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 KIF13BQ9NQT8 1826 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 ZNF646O15015 1829 aaPredicted RBP13.58□□□□□ -0.24
PDGFD-202ENST00000393158 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 TBC1D2BQ9UPU7 963 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
PDGFD-202ENST00000393158 ZNF827Q17R98 1081 aa13.57□□□□□ -0.24
PDGFD-202ENST00000393158 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
PDGFD-202ENST00000393158 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
PDGFD-202ENST00000393158 OTUD7AQ8TE49 926 aaPredicted RBP13.56□□□□□ -0.24
PDGFD-202ENST00000393158 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
PDGFD-202ENST00000393158 A0A0G2JS52 829 aa13.56□□□□□ -0.24
PDGFD-202ENST00000393158 GNAI3P08754 354 aa13.56□□□□□ -0.24
PDGFD-202ENST00000393158 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
PDGFD-202ENST00000393158 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
PDGFD-202ENST00000393158 DDX58O95786 925 aaKnown RBP13.56□□□□□ -0.24
PDGFD-202ENST00000393158 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
PDGFD-202ENST00000393158 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
PDGFD-202ENST00000393158 PLA2G12BQ9BX93 195 aa13.55□□□□□ -0.24
PDGFD-202ENST00000393158 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
PDGFD-202ENST00000393158 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
PDGFD-202ENST00000393158 NTSR2O95665 410 aa13.55□□□□□ -0.24
PDGFD-202ENST00000393158 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
PDGFD-202ENST00000393158 C8orf34Q49A92 452 aa13.55□□□□□ -0.24
PDGFD-202ENST00000393158 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
PDGFD-202ENST00000393158 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
PDGFD-202ENST00000393158 PODXL2Q9NZ53 605 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 CSF1RP07333 972 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 UBE3BQ7Z3V4 1068 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 RGL2O15211 777 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 TXNRD1Q16881 649 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 SRP68Q9UHB9 627 aaKnown RBP13.54□□□□□ -0.24
PDGFD-202ENST00000393158 CACNA1SQ13698 1873 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
PDGFD-202ENST00000393158 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
PDGFD-202ENST00000393158 RIC1Q4ADV7 1423 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 PTPN12Q05209 780 aaKnown RBP13.53□□□□□ -0.24
PDGFD-202ENST00000393158 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 KLHDC4Q8TBB5 520 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
PDGFD-202ENST00000393158 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 SASH1O94885 1247 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 ZBTB38Q8NAP3 1195 aaPredicted RBP13.53□□□□□ -0.24
PDGFD-202ENST00000393158 TSHZ2Q9NRE2 1034 aa13.53□□□□□ -0.24
PDGFD-202ENST00000393158 A0A087WZG4 1122 aa13.52□□□□□ -0.24
PDGFD-202ENST00000393158 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
PDGFD-202ENST00000393158 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
PDGFD-202ENST00000393158 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
PDGFD-202ENST00000393158 CWC25Q9NXE8 425 aaPredicted RBP13.52□□□□□ -0.25
PDGFD-202ENST00000393158 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
PDGFD-202ENST00000393158 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
PDGFD-202ENST00000393158 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
PDGFD-202ENST00000393158 EXOC6BQ9Y2D4 811 aa13.52□□□□□ -0.25
PDGFD-202ENST00000393158 GSPT1P15170 499 aaKnown RBP13.51□□□□□ -0.25
PDGFD-202ENST00000393158 ATG9AQ7Z3C6 839 aa13.51□□□□□ -0.25
PDGFD-202ENST00000393158 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
PDGFD-202ENST00000393158 MYH7P12883 1935 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 CLEC4GQ6UXB4 293 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 GNPATO15228 680 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 GPTP24298 496 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
PDGFD-202ENST00000393158 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 CHMP4BQ9H444 224 aaKnown RBP13.49□□□□□ -0.25
PDGFD-202ENST00000393158 LNPKQ9C0E8 428 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 PNPLA7Q6ZV29 1317 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 GYS1P13807 737 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
PDGFD-202ENST00000393158 C9orf78Q9NZ63 289 aaPredicted RBP13.49□□□□□ -0.25
PDGFD-202ENST00000393158 KIF6Q6ZMV9 814 aa13.48□□□□□ -0.25
PDGFD-202ENST00000393158 TTLL11Q8NHH1 800 aa13.48□□□□□ -0.25
PDGFD-202ENST00000393158 TM4SF1P30408 202 aa13.48□□□□□ -0.25
PDGFD-202ENST00000393158 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
PDGFD-202ENST00000393158 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
PDGFD-202ENST00000393158 OSBPL3Q9H4L5 887 aa13.48□□□□□ -0.25
PDGFD-202ENST00000393158 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
PDGFD-202ENST00000393158 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-202ENST00000393158 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
PDGFD-202ENST00000393158 SEC24BO95487 1268 aa13.47□□□□□ -0.25
PDGFD-202ENST00000393158 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms