RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 CNTROBQ8N137 903 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 ATG3Q9NT62 314 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 ASAP1Q9ULH1 1129 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 ATP5J2-PTCD1G3V325 749 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 H7C1W4 665 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 IFIT2P09913 472 aaKnown RBP24.49■■□□□ 1.51
PTPN11-202ENST00000392597 ECHDC1Q9NTX5 307 aa24.49■■□□□ 1.51
PTPN11-202ENST00000392597 SASH1O94885 1247 aa24.48■■□□□ 1.51
PTPN11-202ENST00000392597 CCDC191Q8NCU4 936 aa24.48■■□□□ 1.51
PTPN11-202ENST00000392597 CWC25Q9NXE8 425 aaPredicted RBP24.48■■□□□ 1.51
PTPN11-202ENST00000392597 K7ELQ4 463 aaPredicted RBP24.47■■□□□ 1.51
PTPN11-202ENST00000392597 STARD3NLO95772 234 aa24.47■■□□□ 1.51
PTPN11-202ENST00000392597 TJP1Q07157 1748 aa24.47■■□□□ 1.51
PTPN11-202ENST00000392597 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
PTPN11-202ENST00000392597 BRWD3Q6RI45 1802 aa24.46■■□□□ 1.51
PTPN11-202ENST00000392597 RFX5P48382 616 aaPredicted RBP24.46■■□□□ 1.51
PTPN11-202ENST00000392597 AACSQ86V21 672 aa24.45■■□□□ 1.51
PTPN11-202ENST00000392597 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.51
PTPN11-202ENST00000392597 MARCH10Q8NA82 808 aaPredicted RBP24.45■■□□□ 1.5
PTPN11-202ENST00000392597 MCCP23508 829 aa24.44■■□□□ 1.5
PTPN11-202ENST00000392597 DNAJC10Q8IXB1 793 aa24.44■■□□□ 1.5
PTPN11-202ENST00000392597 EP400Q96L91 3159 aa24.44■■□□□ 1.5
PTPN11-202ENST00000392597 CD2BP2O95400 341 aaKnown RBP24.43■■□□□ 1.5
PTPN11-202ENST00000392597 DDIT3P35638 169 aa24.43■■□□□ 1.5
PTPN11-202ENST00000392597 PTPN12Q05209 780 aaKnown RBP24.43■■□□□ 1.5
PTPN11-202ENST00000392597 IL17RAQ96F46 866 aa24.43■■□□□ 1.5
PTPN11-202ENST00000392597 ANAPC15P60006 121 aa24.43■■□□□ 1.5
PTPN11-202ENST00000392597 TRIM28Q13263 835 aaKnown RBP24.43■■□□□ 1.5
PTPN11-202ENST00000392597 KRT27Q7Z3Y8 459 aa24.43■■□□□ 1.5
PTPN11-202ENST00000392597 ZBTB3Q9H5J0 574 aa24.43■■□□□ 1.5
PTPN11-202ENST00000392597 CIZ1Q9ULV3 898 aaPredicted RBP24.43■■□□□ 1.5
PTPN11-202ENST00000392597 SPRYD3Q8NCJ5 442 aa24.42■■□□□ 1.5
PTPN11-202ENST00000392597 EAF2Q96CJ1 260 aaPredicted RBP24.42■■□□□ 1.5
PTPN11-202ENST00000392597 ISCA1Q9BUE6 129 aa24.42■■□□□ 1.5
PTPN11-202ENST00000392597 FRAT2O75474 233 aaPredicted RBP24.41■■□□□ 1.5
PTPN11-202ENST00000392597 FOXO4P98177 505 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 IL27Q8NEV9 243 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 SIL1Q9H173 461 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 DOT1LQ8TEK3 1739 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 KIF6Q6ZMV9 814 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 JARID2Q92833 1246 aaPredicted RBP24.41■■□□□ 1.5
PTPN11-202ENST00000392597 ANO2Q9NQ90 1003 aa24.41■■□□□ 1.5
PTPN11-202ENST00000392597 ST18O60284 1047 aa24.4■■□□□ 1.5
PTPN11-202ENST00000392597 TCIRG1Q13488 830 aa24.4■■□□□ 1.5
PTPN11-202ENST00000392597 SGSM2O43147 1006 aa24.39■■□□□ 1.5
PTPN11-202ENST00000392597 MAP4K4O95819 1239 aaPredicted RBP24.39■■□□□ 1.5
PTPN11-202ENST00000392597 KLHDC4Q8TBB5 520 aa24.39■■□□□ 1.5
PTPN11-202ENST00000392597 EVI5LQ96CN4 794 aa24.39■■□□□ 1.5
PTPN11-202ENST00000392597 LMBR1LQ6UX01 489 aa24.38■■□□□ 1.49
PTPN11-202ENST00000392597 KAT6BQ8WYB5 2073 aa24.38■■□□□ 1.49
PTPN11-202ENST00000392597 CYP19A1P11511 503 aaPredicted RBP24.37■■□□□ 1.49
PTPN11-202ENST00000392597 RUFY2Q8WXA3 655 aa24.37■■□□□ 1.49
PTPN11-202ENST00000392597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.37■■□□□ 1.49
PTPN11-202ENST00000392597 HSP90AA1P07900 732 aaKnown RBP24.36■■□□□ 1.49
PTPN11-202ENST00000392597 MAP3K15Q6ZN16 1313 aa24.36■■□□□ 1.49
PTPN11-202ENST00000392597 PRIM1P49642 420 aaKnown RBP24.36■■□□□ 1.49
PTPN11-202ENST00000392597 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
PTPN11-202ENST00000392597 CCDC8Q9H0W5 538 aaPredicted RBP24.36■■□□□ 1.49
PTPN11-202ENST00000392597 HIP1O00291 1037 aa24.35■■□□□ 1.49
PTPN11-202ENST00000392597 RAD50Q92878 1312 aa24.35■■□□□ 1.49
PTPN11-202ENST00000392597 TNNI3KQ59H18 835 aa24.34■■□□□ 1.49
PTPN11-202ENST00000392597 SYTL4Q96C24 671 aaPredicted RBP24.34■■□□□ 1.49
PTPN11-202ENST00000392597 DIAPH3Q9NSV4 1193 aa24.34■■□□□ 1.49
PTPN11-202ENST00000392597 FPGT-TNNI3KV9GXZ4 949 aa24.34■■□□□ 1.49
PTPN11-202ENST00000392597 HSP90AB3PQ58FF7 597 aa24.34■■□□□ 1.49
PTPN11-202ENST00000392597 GIGYF2Q6Y7W6 1299 aaKnown RBP24.34■■□□□ 1.49
PTPN11-202ENST00000392597 IL25Q9H293 177 aa24.34■■□□□ 1.49
PTPN11-202ENST00000392597 HSPA4P34932 840 aa24.33■■□□□ 1.49
PTPN11-202ENST00000392597 FAM182BQ5T319 152 aa24.33■■□□□ 1.49
PTPN11-202ENST00000392597 FAM196AQ6ZSG2 479 aa24.33■■□□□ 1.49
PTPN11-202ENST00000392597 TLR7Q9NYK1 1049 aaKnown RBP24.33■■□□□ 1.49
PTPN11-202ENST00000392597 CICQ96RK0 1608 aaPredicted RBP24.32■■□□□ 1.48
PTPN11-202ENST00000392597 PCCAP05165 728 aaPredicted RBP24.32■■□□□ 1.48
PTPN11-202ENST00000392597 MCM2P49736 904 aa24.32■■□□□ 1.48
PTPN11-202ENST00000392597 TFCP2Q12800 502 aa24.32■■□□□ 1.48
PTPN11-202ENST00000392597 PLA2G12BQ9BX93 195 aa24.32■■□□□ 1.48
PTPN11-202ENST00000392597 GPR108Q9NPR9 543 aa24.32■■□□□ 1.48
PTPN11-202ENST00000392597 ZNF330Q9Y3S2 320 aaPredicted RBP24.32■■□□□ 1.48
PTPN11-202ENST00000392597 ANKRD36CQ5JPF3 1778 aa24.32■■□□□ 1.48
PTPN11-202ENST00000392597 ATP5JP18859 108 aa24.31■■□□□ 1.48
PTPN11-202ENST00000392597 KIAA1211Q6ZU35 1233 aa24.31■■□□□ 1.48
PTPN11-202ENST00000392597 LSG1Q9H089 658 aaKnown RBP24.31■■□□□ 1.48
PTPN11-202ENST00000392597 SBF2Q86WG5 1849 aa24.31■■□□□ 1.48
PTPN11-202ENST00000392597 IL6STP40189 918 aaPredicted RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 IL15P40933 162 aaPredicted RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 CHMP3Q9Y3E7 222 aa24.3■■□□□ 1.48
PTPN11-202ENST00000392597 CIAO1O76071 339 aa24.3■■□□□ 1.48
PTPN11-202ENST00000392597 DEKP35659 375 aaKnown RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 CWC27Q6UX04 472 aaKnown RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 ZBTB38Q8NAP3 1195 aaPredicted RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 DBNLQ9UJU6 430 aaKnown RBP24.3■■□□□ 1.48
PTPN11-202ENST00000392597 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
PTPN11-202ENST00000392597 PALD1Q9ULE6 856 aa24.3■■□□□ 1.48
PTPN11-202ENST00000392597 NHSQ6T4R5 1651 aa24.29■■□□□ 1.48
PTPN11-202ENST00000392597 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
PTPN11-202ENST00000392597 ATG9AQ7Z3C6 839 aa24.29■■□□□ 1.48
PTPN11-202ENST00000392597 ZBTB1Q9Y2K1 713 aa24.29■■□□□ 1.48
PTPN11-202ENST00000392597 ACSBG1Q96GR2 724 aa24.28■■□□□ 1.48
PTPN11-202ENST00000392597 SNRKQ9NRH2 765 aa24.28■■□□□ 1.48
PTPN11-202ENST00000392597 CDHR2Q9BYE9 1310 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms