RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 CAMTA2O94983 1202 aa14.99□□□□□ -0.01
EXOSC9-202ENST00000379663 ATP8B2P98198 1209 aa14.99□□□□□ -0.01
EXOSC9-202ENST00000379663 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
EXOSC9-202ENST00000379663 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
EXOSC9-202ENST00000379663 HDAC5Q9UQL6 1122 aa14.99□□□□□ -0.01
EXOSC9-202ENST00000379663 A0A087WZG4 1122 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 PNMA6EA0A0J9YXQ4 647 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 POTEHQ6S545 545 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 NPM2Q86SE8 214 aaKnown RBP14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 SSH3Q8TE77 659 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 DCTPP1Q9H773 170 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 TBC1D2BQ9UPU7 963 aa14.98□□□□□ -0.01
EXOSC9-202ENST00000379663 H7C1W4 665 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 HMMRO75330 724 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 ILDR1Q86SU0 546 aaPredicted RBP14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 PROM2Q8N271 834 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 SUCLG2Q96I99 432 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 GNPATO15228 680 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 TXNRD1Q16881 649 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 ZNF34Q8IZ26 560 aa14.97□□□□□ -0.01
EXOSC9-202ENST00000379663 HMGB2P26583 209 aaKnown RBP14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 RABL6Q3YEC7 729 aaPredicted RBP14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 CLEC4GQ6UXB4 293 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 UBE3BQ7Z3V4 1068 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 NLRP10Q86W26 655 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 AMIGO3Q86WK7 504 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 UBN2Q6ZU65 1347 aa14.96□□□□□ -0.02
EXOSC9-202ENST00000379663 NUCB1Q02818 461 aa14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 PPP1R42Q7Z4L9 355 aa14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 BICC1Q9H694 974 aaKnown RBP14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 NARFQ9UHQ1 456 aa14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 RTCBQ9Y3I0 505 aaKnown RBP14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 CDHR2Q9BYE9 1310 aa14.95□□□□□ -0.02
EXOSC9-202ENST00000379663 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 APBA3O96018 575 aa14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 PCCAP05165 728 aaPredicted RBP14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 EPHA10Q5JZY3 1008 aa14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 SKAP1Q86WV1 359 aa14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 ARXQ96QS3 562 aa14.94□□□□□ -0.02
EXOSC9-202ENST00000379663 SRGAP3O43295 1099 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 ZBTB38Q8NAP3 1195 aaPredicted RBP14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 AK7Q96M32 723 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 PLA2G12BQ9BX93 195 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 BCL2L12Q9HB09 334 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 ZNF652Q9Y2D9 606 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 LRP5O75197 1615 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 A0A1B0GUL6 1792 aa14.93□□□□□ -0.02
EXOSC9-202ENST00000379663 GPTP24298 496 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 USP42Q9H9J4 1324 aaKnown RBP14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 NRXN2Q9P2S2 1712 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 SSFA2P28290 1259 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 FOXO4P98177 505 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 PARP10Q53GL7 1025 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 ARHGEF1Q92888 912 aaKnown RBP14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
EXOSC9-202ENST00000379663 AK9Q5TCS8 1911 aa14.91□□□□□ -0.02
EXOSC9-202ENST00000379663 SMIM5Q71RC9 77 aa14.91□□□□□ -0.02
EXOSC9-202ENST00000379663 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
EXOSC9-202ENST00000379663 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
EXOSC9-202ENST00000379663 PDE4AP27815 886 aa14.9□□□□□ -0.02
EXOSC9-202ENST00000379663 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
EXOSC9-202ENST00000379663 TNRC6CQ9HCJ0 1690 aaKnown RBP14.9□□□□□ -0.02
EXOSC9-202ENST00000379663 NTSR2O95665 410 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 RFX5P48382 616 aaPredicted RBP14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 TRAPPC3LQ5T215 181 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 USPL1Q5W0Q7 1092 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 SRP68Q9UHB9 627 aaKnown RBP14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 TAF1P21675 1872 aa14.89□□□□□ -0.03
EXOSC9-202ENST00000379663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 ZNF827Q17R98 1081 aa14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 ANKRD45Q5TZF3 282 aa14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 SUSD4Q5VX71 490 aa14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 LNPKQ9C0E8 428 aa14.88□□□□□ -0.03
EXOSC9-202ENST00000379663 ZPR1O75312 459 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 RGS3P49796 1198 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 RTL5Q5HYW3 569 aaPredicted RBP14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 COPRSQ9NQ92 184 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 TRMT112Q9UI30 125 aaKnown RBP14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 ANKRD31Q8N7Z5 1873 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 RAB11FIP3O75154 756 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 PHF14O94880 888 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 CSF1RP07333 972 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 RFC4P35249 363 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 LMBR1LQ6UX01 489 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 SYNE4Q8N205 404 aa14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 UTP14AQ9BVJ6 771 aaKnown RBP14.87□□□□□ -0.03
EXOSC9-202ENST00000379663 ARAP2Q8WZ64 1704 aa14.86□□□□□ -0.03
EXOSC9-202ENST00000379663 ZBTB22O15209 634 aa14.86□□□□□ -0.03
EXOSC9-202ENST00000379663 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
EXOSC9-202ENST00000379663 PTPN12Q05209 780 aaKnown RBP14.86□□□□□ -0.03
EXOSC9-202ENST00000379663 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms