RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 CABP2Q9NPB3 220 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 RBM43Q6ZSC3 357 aaKnown RBP15.23■□□□□ 0.03
PRPF4-201ENST00000374198 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 LARP6Q9BRS8 491 aaKnown RBP15.23■□□□□ 0.03
PRPF4-201ENST00000374198 LCMT1Q9UIC8 334 aa15.23■□□□□ 0.03
PRPF4-201ENST00000374198 ELP1O95163 1332 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 FYB1O15117 783 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 GJB2P29033 226 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 ST5P78524 1137 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 ZSCAN26Q16670 478 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 ICE2Q659A1 982 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 CCDC191Q8NCU4 936 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 TMX1Q9H3N1 280 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 TULP4Q9NRJ4 1543 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 CCZ1BP86790 482 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 CCZ1P86791 482 aaPredicted RBP15.22■□□□□ 0.03
PRPF4-201ENST00000374198 GPS2Q13227 327 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
PRPF4-201ENST00000374198 ARHGAP29Q52LW3 1261 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 TMCO3Q6UWJ1 677 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 MRFAP1L1Q96HT8 127 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 ATG3Q9NT62 314 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 ADGRB1O14514 1584 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 CCDC69A6NI79 296 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 KRT85P78386 507 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 CCDC93Q567U6 631 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 SARM1Q6SZW1 724 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 FILIP1Q7Z7B0 1213 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 CWC15Q9P013 229 aaKnown RBP15.21■□□□□ 0.03
PRPF4-201ENST00000374198 EXOC6BQ9Y2D4 811 aa15.21■□□□□ 0.03
PRPF4-201ENST00000374198 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.21■□□□□ 0.02
PRPF4-201ENST00000374198 GYS2P54840 703 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 LRRN4CLQ8ND94 238 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 UBXN6Q9BZV1 441 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 IL25Q9H293 177 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
PRPF4-201ENST00000374198 ARGLU1Q9NWB6 273 aaPredicted RBP15.2■□□□□ 0.02
PRPF4-201ENST00000374198 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
PRPF4-201ENST00000374198 CLSTN2Q9H4D0 955 aa15.2■□□□□ 0.02
PRPF4-201ENST00000374198 YTHDC2Q9H6S0 1430 aaKnown RBP15.2■□□□□ 0.02
PRPF4-201ENST00000374198 LOC102724159A0A0B4J2E5 919 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 PWP2Q15269 919 aaKnown RBP15.19■□□□□ 0.02
PRPF4-201ENST00000374198 WAPLQ7Z5K2 1190 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 ADGRL3Q9HAR2 1447 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 CAVIN2O95810 425 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 SNW1Q13573 536 aaKnown RBP15.19■□□□□ 0.02
PRPF4-201ENST00000374198 TUBGCP6Q96RT7 1819 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 LARGE1O95461 756 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 UNC5CLQ8IV45 518 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 CCDC83Q8IWF9 413 aa15.19■□□□□ 0.02
PRPF4-201ENST00000374198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRPF4-201ENST00000374198 ATP8B1O43520 1251 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 HMOX1P09601 288 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 PSEN1P49768 467 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 SRLQ86TD4 932 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 FBXO18Q8NFZ0 1043 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 LRRCC1Q9C099 1032 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 BRMS1Q9HCU9 246 aa15.18■□□□□ 0.02
PRPF4-201ENST00000374198 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 GOLGA5Q8TBA6 731 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 ORC3Q9UBD5 711 aaPredicted RBP15.17■□□□□ 0.02
PRPF4-201ENST00000374198 STAP2Q9UGK3 403 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 DCCP43146 1447 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 ROBO1Q9Y6N7 1651 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 DTNBO60941 627 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 IQCB1Q15051 598 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
PRPF4-201ENST00000374198 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
PRPF4-201ENST00000374198 RRP15Q9Y3B9 282 aaKnown RBP15.17■□□□□ 0.02
PRPF4-201ENST00000374198 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 OAS2P29728 719 aaKnown RBP15.16■□□□□ 0.02
PRPF4-201ENST00000374198 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 NALCNQ8IZF0 1738 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
PRPF4-201ENST00000374198 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
PRPF4-201ENST00000374198 GOLGA6L1Q8N7Z2 621 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 UBXN4Q92575 508 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 MYCBPQ99417 103 aaPredicted RBP15.16■□□□□ 0.02
PRPF4-201ENST00000374198 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
PRPF4-201ENST00000374198 TECPR2O15040 1411 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 NPHP3Q7Z494 1330 aa15.16■□□□□ 0.02
PRPF4-201ENST00000374198 LMOD3Q0VAK6 560 aa15.15■□□□□ 0.02
PRPF4-201ENST00000374198 NCAPGQ9BPX3 1015 aa15.15■□□□□ 0.02
PRPF4-201ENST00000374198 ANKRD26Q9UPS8 1709 aa15.15■□□□□ 0.02
PRPF4-201ENST00000374198 AK7Q96M32 723 aa15.15■□□□□ 0.02
PRPF4-201ENST00000374198 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
PRPF4-201ENST00000374198 HDAC5Q9UQL6 1122 aa15.15■□□□□ 0.02
PRPF4-201ENST00000374198 CPSF1Q10570 1443 aaKnown RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 E4F1Q66K89 784 aaPredicted RBP15.14■□□□□ 0.01
PRPF4-201ENST00000374198 FAM173BQ6P4H8 233 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms