RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
NIF3L1-201ENST00000359683 TM4SF1P30408 202 aa15.7■□□□□ 0.1
NIF3L1-201ENST00000359683 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
NIF3L1-201ENST00000359683 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
NIF3L1-201ENST00000359683 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
NIF3L1-201ENST00000359683 CWF19L2Q2TBE0 894 aaKnown RBP15.69■□□□□ 0.1
NIF3L1-201ENST00000359683 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
NIF3L1-201ENST00000359683 GPTP24298 496 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 NLRP10Q86W26 655 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 KLHL34Q8N239 644 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 GCKRQ14397 625 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 MVPQ14764 893 aaKnown RBP15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 NFIXQ14938 502 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 PARP10Q53GL7 1025 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
NIF3L1-201ENST00000359683 ANKRD36CQ5JPF3 1778 aa15.67■□□□□ 0.1
NIF3L1-201ENST00000359683 POLD1P28340 1107 aa15.67■□□□□ 0.1
NIF3L1-201ENST00000359683 CWC25Q9NXE8 425 aaPredicted RBP15.67■□□□□ 0.1
NIF3L1-201ENST00000359683 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
NIF3L1-201ENST00000359683 N4BP2Q86UW6 1770 aaPredicted RBP15.66■□□□□ 0.1
NIF3L1-201ENST00000359683 SUSD4Q5VX71 490 aa15.66■□□□□ 0.1
NIF3L1-201ENST00000359683 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
NIF3L1-201ENST00000359683 ITPRIPQ8IWB1 547 aa15.66■□□□□ 0.1
NIF3L1-201ENST00000359683 USP44Q9H0E7 712 aa15.66■□□□□ 0.1
NIF3L1-201ENST00000359683 H7C1W4 665 aa15.65■□□□□ 0.1
NIF3L1-201ENST00000359683 ZBTB7BO15156 539 aaPredicted RBP15.65■□□□□ 0.1
NIF3L1-201ENST00000359683 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
NIF3L1-201ENST00000359683 DDX19BQ9UMR2 479 aa15.65■□□□□ 0.1
NIF3L1-201ENST00000359683 UTYO14607 1347 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 GRM8O00222 908 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 NTSR2O95665 410 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 DDR1Q08345 913 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 MSL1Q68DK7 614 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 ZBTB38Q8NAP3 1195 aaPredicted RBP15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 CRBNQ96SW2 442 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 UTP14AQ9BVJ6 771 aaKnown RBP15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 CARMIL3Q8ND23 1372 aa15.64■□□□□ 0.09
NIF3L1-201ENST00000359683 AFDNP55196 1824 aaKnown RBP15.63■□□□□ 0.09
NIF3L1-201ENST00000359683 MMP10P09238 476 aa15.63■□□□□ 0.09
NIF3L1-201ENST00000359683 CASP7P55210 303 aa15.63■□□□□ 0.09
NIF3L1-201ENST00000359683 C9orf78Q9NZ63 289 aaPredicted RBP15.63■□□□□ 0.09
NIF3L1-201ENST00000359683 TRMT112Q9UI30 125 aaKnown RBP15.63■□□□□ 0.09
NIF3L1-201ENST00000359683 SERPINB2P05120 415 aa15.62■□□□□ 0.09
NIF3L1-201ENST00000359683 NBPF7P0C2Y1 421 aaPredicted RBP15.62■□□□□ 0.09
NIF3L1-201ENST00000359683 TPTE2Q6XPS3 522 aa15.62■□□□□ 0.09
NIF3L1-201ENST00000359683 MEIS3Q99687 375 aa15.62■□□□□ 0.09
NIF3L1-201ENST00000359683 NYXQ9GZU5 481 aa15.62■□□□□ 0.09
NIF3L1-201ENST00000359683 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 GNAI3P08754 354 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 IRX6P78412 446 aaPredicted RBP15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 FAM89AQ96GI7 184 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 SLC10A5Q5PT55 438 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 UBE3BQ7Z3V4 1068 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 SH3TC1Q8TE82 1336 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 JARID2Q92833 1246 aaPredicted RBP15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 ZBTB40Q9NUA8 1239 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 PARP3Q9Y6F1 533 aa15.61■□□□□ 0.09
NIF3L1-201ENST00000359683 CDHR2Q9BYE9 1310 aa15.6■□□□□ 0.09
NIF3L1-201ENST00000359683 GPR162Q16538 588 aa15.6■□□□□ 0.09
NIF3L1-201ENST00000359683 PELP1Q8IZL8 1130 aaKnown RBP15.6■□□□□ 0.09
NIF3L1-201ENST00000359683 NLGN2Q8NFZ4 835 aa15.6■□□□□ 0.09
NIF3L1-201ENST00000359683 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
NIF3L1-201ENST00000359683 UBTFL1P0CB47 393 aaPredicted RBP15.59■□□□□ 0.09
NIF3L1-201ENST00000359683 ERFEQ4G0M1 354 aa15.59■□□□□ 0.09
NIF3L1-201ENST00000359683 PRR5LQ6MZQ0 368 aa15.59■□□□□ 0.09
NIF3L1-201ENST00000359683 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
NIF3L1-201ENST00000359683 HDAC5Q9UQL6 1122 aa15.59■□□□□ 0.09
NIF3L1-201ENST00000359683 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 AAMPQ13685 434 aa15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 CNBD1Q8NA66 436 aa15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 KAZALD1Q96I82 304 aa15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 PLA2G12BQ9BX93 195 aa15.58■□□□□ 0.09
NIF3L1-201ENST00000359683 UTRNP46939 3433 aa15.58■□□□□ 0.08
NIF3L1-201ENST00000359683 NRXN2Q9P2S2 1712 aa15.58■□□□□ 0.08
NIF3L1-201ENST00000359683 NEFLP07196 543 aa15.57■□□□□ 0.08
NIF3L1-201ENST00000359683 GTF2E1P29083 439 aaPredicted RBP15.57■□□□□ 0.08
NIF3L1-201ENST00000359683 SUCLG2Q96I99 432 aa15.57■□□□□ 0.08
NIF3L1-201ENST00000359683 GNAI2P04899 355 aa15.57■□□□□ 0.08
NIF3L1-201ENST00000359683 HSP90B1P14625 803 aaKnown RBP15.57■□□□□ 0.08
NIF3L1-201ENST00000359683 PDE8AO60658 829 aa15.56■□□□□ 0.08
NIF3L1-201ENST00000359683 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
NIF3L1-201ENST00000359683 EPHA10Q5JZY3 1008 aa15.56■□□□□ 0.08
NIF3L1-201ENST00000359683 LRRFIP2Q9Y608 721 aaKnown RBP15.56■□□□□ 0.08
NIF3L1-201ENST00000359683 ABCC12Q96J65 1359 aa15.56■□□□□ 0.08
NIF3L1-201ENST00000359683 NPHP1O15259 732 aa15.55■□□□□ 0.08
NIF3L1-201ENST00000359683 ST5P78524 1137 aa15.55■□□□□ 0.08
NIF3L1-201ENST00000359683 FOXO4P98177 505 aa15.55■□□□□ 0.08
NIF3L1-201ENST00000359683 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
NIF3L1-201ENST00000359683 CSF1RP07333 972 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms