RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 EIF5P55010 431 aaKnown RBP16.48■□□□□ 0.23
UBA3-201ENST00000349511 CASP7P55210 303 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 OS9Q13438 667 aaPredicted RBP16.48■□□□□ 0.23
UBA3-201ENST00000349511 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 MTX1Q13505 466 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 ISCA1Q9BUE6 129 aa16.48■□□□□ 0.23
UBA3-201ENST00000349511 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
UBA3-201ENST00000349511 H7C1W4 665 aa16.47■□□□□ 0.23
UBA3-201ENST00000349511 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
UBA3-201ENST00000349511 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
UBA3-201ENST00000349511 ZNF772Q68DY9 489 aaPredicted RBP16.46■□□□□ 0.23
UBA3-201ENST00000349511 CCNL1Q9UK58 526 aaPredicted RBP16.46■□□□□ 0.23
UBA3-201ENST00000349511 TRIM37O94972 964 aa16.46■□□□□ 0.23
UBA3-201ENST00000349511 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
UBA3-201ENST00000349511 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
UBA3-201ENST00000349511 CCDC85AQ96PX6 553 aaPredicted RBP16.46■□□□□ 0.23
UBA3-201ENST00000349511 NHSQ6T4R5 1651 aa16.46■□□□□ 0.22
UBA3-201ENST00000349511 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
UBA3-201ENST00000349511 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
UBA3-201ENST00000349511 RBM6P78332 1123 aaKnown RBP16.45■□□□□ 0.22
UBA3-201ENST00000349511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
UBA3-201ENST00000349511 NUP98P52948 1817 aa16.44■□□□□ 0.22
UBA3-201ENST00000349511 FOXO4P98177 505 aa16.44■□□□□ 0.22
UBA3-201ENST00000349511 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
UBA3-201ENST00000349511 RAB11FIP3O75154 756 aa16.43■□□□□ 0.22
UBA3-201ENST00000349511 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
UBA3-201ENST00000349511 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
UBA3-201ENST00000349511 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
UBA3-201ENST00000349511 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
UBA3-201ENST00000349511 COL15A1P39059 1388 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 ERVV-1B6SEH8 477 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 CAMTA2O94983 1202 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 PDE1AP54750 535 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBA3-201ENST00000349511 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 FAM196AQ6ZSG2 479 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 GNPATO15228 680 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
UBA3-201ENST00000349511 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
UBA3-201ENST00000349511 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 AMIGO3Q86WK7 504 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 CHMP5Q9NZZ3 219 aa16.42■□□□□ 0.22
UBA3-201ENST00000349511 TRMT112Q9UI30 125 aaKnown RBP16.42■□□□□ 0.22
UBA3-201ENST00000349511 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
UBA3-201ENST00000349511 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
UBA3-201ENST00000349511 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
UBA3-201ENST00000349511 SASH1O94885 1247 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 MX1P20591 662 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 RXRBP28702 533 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 MCM4P33991 863 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 PHF14O94880 888 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 PCCAP05165 728 aaPredicted RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
UBA3-201ENST00000349511 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 RGS17Q9UGC6 210 aaPredicted RBP16.4■□□□□ 0.22
UBA3-201ENST00000349511 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
UBA3-201ENST00000349511 BICDL1Q6ZP65 573 aa16.39■□□□□ 0.21
UBA3-201ENST00000349511 ZNF34Q8IZ26 560 aa16.39■□□□□ 0.21
UBA3-201ENST00000349511 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
UBA3-201ENST00000349511 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.21
UBA3-201ENST00000349511 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
UBA3-201ENST00000349511 SDSP20132 328 aa16.38■□□□□ 0.21
UBA3-201ENST00000349511 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
UBA3-201ENST00000349511 RREB1Q92766 1687 aa16.38■□□□□ 0.21
UBA3-201ENST00000349511 ANKRD36CQ5JPF3 1778 aa16.38■□□□□ 0.21
UBA3-201ENST00000349511 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 L1TD1Q5T7N2 865 aaKnown RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 POTEAQ6S8J7 498 aa16.37■□□□□ 0.21
UBA3-201ENST00000349511 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
UBA3-201ENST00000349511 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 CICQ96RK0 1608 aaPredicted RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 AACSQ86V21 672 aa16.37■□□□□ 0.21
UBA3-201ENST00000349511 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
UBA3-201ENST00000349511 RTCBQ9Y3I0 505 aaKnown RBP16.37■□□□□ 0.21
UBA3-201ENST00000349511 LY75O60449 1722 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
UBA3-201ENST00000349511 USPL1Q5W0Q7 1092 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 TBC1D9Q6ZT07 1266 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 TFCP2Q12800 502 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 SNX21Q969T3 373 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
UBA3-201ENST00000349511 EAF2Q96CJ1 260 aaPredicted RBP16.36■□□□□ 0.21
UBA3-201ENST00000349511 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
UBA3-201ENST00000349511 ZNF831Q5JPB2 1677 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms