RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ANAPC15P60006 121 aa17.89■□□□□ 0.45
PTBP1-201ENST00000349038 KRT85P78386 507 aa17.89■□□□□ 0.45
PTBP1-201ENST00000349038 EIF4A2Q14240 407 aaKnown RBP17.89■□□□□ 0.45
PTBP1-201ENST00000349038 NR1I2O75469 434 aa17.88■□□□□ 0.45
PTBP1-201ENST00000349038 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
PTBP1-201ENST00000349038 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
PTBP1-201ENST00000349038 CCDC191Q8NCU4 936 aa17.88■□□□□ 0.45
PTBP1-201ENST00000349038 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
PTBP1-201ENST00000349038 SMC2O95347 1197 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 LMAN1P49257 510 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 LRRFIP2Q9Y608 721 aaKnown RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 SLU7O95391 586 aaKnown RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 ADCK5Q3MIX3 580 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 ZNF446Q9NWS9 450 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 FEZ2Q9UHY8 353 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 RPAP1Q9BWH6 1393 aaPredicted RBP17.87■□□□□ 0.45
PTBP1-201ENST00000349038 AKAP12Q02952 1782 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 PDRG1Q9NUG6 133 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 SNX14Q9Y5W7 946 aa17.87■□□□□ 0.45
PTBP1-201ENST00000349038 SSH2Q76I76 1423 aa17.86■□□□□ 0.45
PTBP1-201ENST00000349038 URI1O94763 535 aaPredicted RBP17.86■□□□□ 0.45
PTBP1-201ENST00000349038 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
PTBP1-201ENST00000349038 MNS1Q8NEH6 495 aa17.86■□□□□ 0.45
PTBP1-201ENST00000349038 MTMR6Q9Y217 621 aa17.86■□□□□ 0.45
PTBP1-201ENST00000349038 HSP90B1P14625 803 aaKnown RBP17.86■□□□□ 0.45
PTBP1-201ENST00000349038 TEX35Q5T0J7 233 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 RAD50Q92878 1312 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 NCKAP5LQ9HCH0 1330 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 BIN1O00499 593 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 CLCN6P51797 869 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 BMS1Q14692 1282 aaKnown RBP17.85■□□□□ 0.45
PTBP1-201ENST00000349038 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 DNAI1Q9UI46 699 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 LCMT1Q9UIC8 334 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 LRRC8AQ8IWT6 810 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 UBXN4Q92575 508 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 CCDC61Q9Y6R9 512 aa17.85■□□□□ 0.45
PTBP1-201ENST00000349038 SNW1Q13573 536 aaKnown RBP17.84■□□□□ 0.45
PTBP1-201ENST00000349038 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
PTBP1-201ENST00000349038 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
PTBP1-201ENST00000349038 NRXN3Q9Y4C0 1643 aa17.84■□□□□ 0.45
PTBP1-201ENST00000349038 RGPD1P0DJD0 1748 aa17.84■□□□□ 0.45
PTBP1-201ENST00000349038 GNAI2P04899 355 aa17.83■□□□□ 0.45
PTBP1-201ENST00000349038 ZRSR1Q15695 479 aaKnown RBP17.83■□□□□ 0.45
PTBP1-201ENST00000349038 FTOQ9C0B1 505 aaKnown RBP eCLIP17.83■□□□□ 0.45
PTBP1-201ENST00000349038 GUCY1B3Q02153 619 aa17.83■□□□□ 0.44
PTBP1-201ENST00000349038 GOLGA8FQ08AF8 430 aa17.83■□□□□ 0.44
PTBP1-201ENST00000349038 GOLGA8DPQ0D2H9 430 aa17.83■□□□□ 0.44
PTBP1-201ENST00000349038 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
PTBP1-201ENST00000349038 C11orf57Q6ZUT1 292 aaPredicted RBP17.82■□□□□ 0.44
PTBP1-201ENST00000349038 SMARCE1Q969G3 411 aa17.82■□□□□ 0.44
PTBP1-201ENST00000349038 PLEKHA4Q9H4M7 779 aa17.82■□□□□ 0.44
PTBP1-201ENST00000349038 STAP2Q9UGK3 403 aa17.82■□□□□ 0.44
PTBP1-201ENST00000349038 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 H3BQV1 296 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 PHACTR2O75167 634 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
PTBP1-201ENST00000349038 IFFO2Q5TF58 517 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 TMEM87AQ8NBN3 555 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 METP08581 1390 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 GTF2A1P52655 376 aaPredicted RBP17.81■□□□□ 0.44
PTBP1-201ENST00000349038 ME3Q16798 604 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 DRC1Q96MC2 740 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 SIL1Q9H173 461 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 RASSF4Q9H2L5 321 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
PTBP1-201ENST00000349038 PNMA6AP0CW24 399 aaPredicted RBP17.8■□□□□ 0.44
PTBP1-201ENST00000349038 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
PTBP1-201ENST00000349038 TMC6Q7Z403 805 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 PEAK1Q9H792 1746 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
PTBP1-201ENST00000349038 FOXO3O43524 673 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 AOPEPQ8N6M6 819 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 OVOS2A0A0J9YW53 1432 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 OVOS2Q6IE36 1432 aa17.8■□□□□ 0.44
PTBP1-201ENST00000349038 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 E2F4Q16254 413 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 PRR36Q9H6K5 1346 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 IBSPP21815 317 aaPredicted RBP17.79■□□□□ 0.44
PTBP1-201ENST00000349038 PTH1RQ03431 593 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 SART3Q15020 963 aaKnown RBP17.79■□□□□ 0.44
PTBP1-201ENST00000349038 CYP46A1Q9Y6A2 500 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 TECPR2O15040 1411 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
PTBP1-201ENST00000349038 CYP2C19P33261 490 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 HSPA4P34932 840 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 ZSCAN26Q16670 478 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 SIRT1Q96EB6 747 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 CARD6Q9BX69 1037 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
PTBP1-201ENST00000349038 OAS2P29728 719 aaKnown RBP17.78■□□□□ 0.44
PTBP1-201ENST00000349038 TXNDC2Q86VQ3 553 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms