RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 CYP27B1O15528 508 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 EXOC6BQ9Y2D4 811 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 FOXO4P98177 505 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.91□□□□□ -0.82
CFAP54-201ENST00000342887 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
CFAP54-201ENST00000342887 GPR108Q9NPR9 543 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
CFAP54-201ENST00000342887 ZSCAN23Q3MJ62 389 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 RTF1Q92541 710 aaKnown RBP9.91□□□□□ -0.82
CFAP54-201ENST00000342887 TMEM63CQ9P1W3 806 aa9.91□□□□□ -0.82
CFAP54-201ENST00000342887 NRXN2Q9P2S2 1712 aa9.9□□□□□ -0.82
CFAP54-201ENST00000342887 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
CFAP54-201ENST00000342887 PLEKHO1Q53GL0 409 aaPredicted RBP9.9□□□□□ -0.82
CFAP54-201ENST00000342887 HDGFL1Q5TGJ6 251 aa9.9□□□□□ -0.82
CFAP54-201ENST00000342887 SUCLG2Q96I99 432 aa9.9□□□□□ -0.82
CFAP54-201ENST00000342887 NEDD4P46934 1319 aa9.9□□□□□ -0.82
CFAP54-201ENST00000342887 PLA2G12BQ9BX93 195 aa9.9□□□□□ -0.82
CFAP54-201ENST00000342887 H7C1W4 665 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 VPS53Q5VIR6 699 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 ZNF790Q6PG37 636 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 GBP4Q96PP9 640 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 METTL22Q9BUU2 404 aaPredicted RBP9.89□□□□□ -0.83
CFAP54-201ENST00000342887 SH3TC1Q8TE82 1336 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 PI4KAP2A4QPH2 592 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 PI4KAP1Q8N8J0 262 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 ELP1O95163 1332 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 USHBP1Q8N6Y0 703 aa9.89□□□□□ -0.83
CFAP54-201ENST00000342887 GOLGA6L3A6NEY3 463 aa9.88□□□□□ -0.83
CFAP54-201ENST00000342887 PTPN12Q05209 780 aaKnown RBP9.88□□□□□ -0.83
CFAP54-201ENST00000342887 ATG9AQ7Z3C6 839 aa9.88□□□□□ -0.83
CFAP54-201ENST00000342887 STK31Q9BXU1 1019 aa9.88□□□□□ -0.83
CFAP54-201ENST00000342887 GREB1LQ9C091 1923 aaPredicted RBP9.88□□□□□ -0.83
CFAP54-201ENST00000342887 GCKRQ14397 625 aa9.88□□□□□ -0.83
CFAP54-201ENST00000342887 LRSAM1Q6UWE0 723 aa9.88□□□□□ -0.83
CFAP54-201ENST00000342887 BCL9O00512 1426 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 UBTFL1P0CB47 393 aaPredicted RBP9.87□□□□□ -0.83
CFAP54-201ENST00000342887 GRM8O00222 908 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 PTH1RQ03431 593 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 EAF2Q96CJ1 260 aaPredicted RBP9.87□□□□□ -0.83
CFAP54-201ENST00000342887 LARGE1O95461 756 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 TOB2Q14106 344 aaPredicted RBP9.87□□□□□ -0.83
CFAP54-201ENST00000342887 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 WDR17Q8IZU2 1322 aa9.87□□□□□ -0.83
CFAP54-201ENST00000342887 ATP5JP18859 108 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 TRIM28Q13263 835 aaKnown RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 FKBP5Q13451 457 aaPredicted RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 HSP90AB4PQ58FF6 505 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 KRT28Q7Z3Y7 464 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 SENP3Q9H4L4 574 aaPredicted RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 NBPF26B4DH59 902 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 GLRX3O76003 335 aaKnown RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 NBPF10Q6P3W6 841 aaKnown RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 NBPF15Q8N660 670 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 DCAF5Q96JK2 942 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 MAP3K2Q9Y2U5 619 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 ADD1P35611 737 aaKnown RBP9.86□□□□□ -0.83
CFAP54-201ENST00000342887 TSHZ3Q63HK5 1081 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 SMARCC2Q8TAQ2 1214 aa9.86□□□□□ -0.83
CFAP54-201ENST00000342887 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ST18O60284 1047 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 CCDC173Q0VFZ6 552 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 PDIA4P13667 645 aaKnown RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ERC1Q8IUD2 1116 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 BICC1Q9H694 974 aaKnown RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 NOL7Q9UMY1 257 aaKnown RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 CIAO1O76071 339 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ADCK5Q3MIX3 580 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
CFAP54-201ENST00000342887 BTAF1O14981 1849 aa9.85□□□□□ -0.83
CFAP54-201ENST00000342887 ISCA1Q9BUE6 129 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 MTMR6Q9Y217 621 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 DUOX1Q9NRD9 1551 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 MYH6P13533 1939 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 ERVV-2B6SEH9 535 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 AK2P54819 239 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 EXOSC10Q01780 885 aaKnown RBP9.84□□□□□ -0.83
CFAP54-201ENST00000342887 HAUS7Q99871 368 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
CFAP54-201ENST00000342887 FBXO3Q9UK99 471 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 ZMYM6O95789 1325 aa9.84□□□□□ -0.83
CFAP54-201ENST00000342887 RTL9Q8NET4 1388 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 CCDC88AQ3V6T2 1871 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 NUTM2FA1L443 756 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 VGLL2Q8N8G2 317 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 TAF6LQ9Y6J9 622 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
CFAP54-201ENST00000342887 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 TAF5LO75529 589 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 CSF1RP07333 972 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 MPRIPQ6WCQ1 1025 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
CFAP54-201ENST00000342887 MYH1P12882 1939 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms