RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
PBX3-201ENST00000342287 KAZALD1Q96I82 304 aa17.89■□□□□ 0.45
PBX3-201ENST00000342287 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
PBX3-201ENST00000342287 ZBTB3Q9H5J0 574 aa17.89■□□□□ 0.45
PBX3-201ENST00000342287 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
PBX3-201ENST00000342287 ARFGEF2Q9Y6D5 1785 aa17.88■□□□□ 0.45
PBX3-201ENST00000342287 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
PBX3-201ENST00000342287 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
PBX3-201ENST00000342287 AFF2P51816 1311 aa17.88■□□□□ 0.45
PBX3-201ENST00000342287 A0A087WZG4 1122 aa17.88■□□□□ 0.45
PBX3-201ENST00000342287 SEC24BO95487 1268 aa17.88■□□□□ 0.45
PBX3-201ENST00000342287 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
PBX3-201ENST00000342287 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
PBX3-201ENST00000342287 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
PBX3-201ENST00000342287 R3HCC1Q9Y3T6 440 aaKnown RBP17.87■□□□□ 0.45
PBX3-201ENST00000342287 KCNQ2O43526 872 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
PBX3-201ENST00000342287 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 KIF1BPQ96EK5 621 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 UPF2Q9HAU5 1272 aaKnown RBP17.86■□□□□ 0.45
PBX3-201ENST00000342287 COL15A1P39059 1388 aa17.86■□□□□ 0.45
PBX3-201ENST00000342287 LOC102724428A0A0B4J2F2 783 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 ATP6V1AP38606 617 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 SIK1P57059 783 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
PBX3-201ENST00000342287 H7C1W4 665 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 OFD1O75665 1012 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 TCIRG1Q13488 830 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 BECN1Q14457 450 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 ZBTB1Q9Y2K1 713 aa17.85■□□□□ 0.45
PBX3-201ENST00000342287 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
PBX3-201ENST00000342287 IL6STP40189 918 aaPredicted RBP17.84■□□□□ 0.45
PBX3-201ENST00000342287 PDE1AP54750 535 aa17.84■□□□□ 0.45
PBX3-201ENST00000342287 GSPT1P15170 499 aaKnown RBP17.84■□□□□ 0.45
PBX3-201ENST00000342287 ZSCAN20P17040 1043 aaPredicted RBP17.84■□□□□ 0.45
PBX3-201ENST00000342287 CASP7P55210 303 aa17.84■□□□□ 0.45
PBX3-201ENST00000342287 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
PBX3-201ENST00000342287 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
PBX3-201ENST00000342287 MAP3K15Q6ZN16 1313 aa17.84■□□□□ 0.45
PBX3-201ENST00000342287 TRIM28Q13263 835 aaKnown RBP17.83■□□□□ 0.45
PBX3-201ENST00000342287 OS9Q13438 667 aaPredicted RBP17.83■□□□□ 0.45
PBX3-201ENST00000342287 ISCA1Q9BUE6 129 aa17.83■□□□□ 0.45
PBX3-201ENST00000342287 ONECUT3O60422 494 aaPredicted RBP17.83■□□□□ 0.44
PBX3-201ENST00000342287 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
PBX3-201ENST00000342287 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.83■□□□□ 0.44
PBX3-201ENST00000342287 ERC1Q8IUD2 1116 aa17.83■□□□□ 0.44
PBX3-201ENST00000342287 THSD7AQ9UPZ6 1657 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 SALL3Q9BXA9 1300 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 ATRNO75882 1429 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 AFDNP55196 1824 aaKnown RBP17.82■□□□□ 0.44
PBX3-201ENST00000342287 TRAK2O60296 914 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 MX1P20591 662 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
PBX3-201ENST00000342287 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
PBX3-201ENST00000342287 IL1RAPL2Q9NP60 686 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 TJP1Q07157 1748 aa17.82■□□□□ 0.44
PBX3-201ENST00000342287 CCDC87Q9NVE4 849 aa17.81■□□□□ 0.44
PBX3-201ENST00000342287 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
PBX3-201ENST00000342287 MCM4P33991 863 aa17.81■□□□□ 0.44
PBX3-201ENST00000342287 INTS5Q6P9B9 1019 aaKnown RBP17.81■□□□□ 0.44
PBX3-201ENST00000342287 STAP2Q9UGK3 403 aa17.81■□□□□ 0.44
PBX3-201ENST00000342287 UQCRHLA0A096LP55 91 aa17.8■□□□□ 0.44
PBX3-201ENST00000342287 UQCRHP07919 91 aa17.8■□□□□ 0.44
PBX3-201ENST00000342287 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
PBX3-201ENST00000342287 G3BP1Q13283 466 aaKnown RBP eCLIP17.8■□□□□ 0.44
PBX3-201ENST00000342287 HSP90AB3PQ58FF7 597 aa17.8■□□□□ 0.44
PBX3-201ENST00000342287 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
PBX3-201ENST00000342287 ITPK1Q13572 414 aa17.8■□□□□ 0.44
PBX3-201ENST00000342287 CDC45O75419 566 aa17.79■□□□□ 0.44
PBX3-201ENST00000342287 SPRYD3Q8NCJ5 442 aa17.79■□□□□ 0.44
PBX3-201ENST00000342287 QTRT2Q9H974 415 aaKnown RBP17.79■□□□□ 0.44
PBX3-201ENST00000342287 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
PBX3-201ENST00000342287 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
PBX3-201ENST00000342287 MTERF4Q7Z6M4 381 aaKnown RBP17.79■□□□□ 0.44
PBX3-201ENST00000342287 DZIP3Q86Y13 1208 aaKnown RBP17.79■□□□□ 0.44
PBX3-201ENST00000342287 SDSP20132 328 aa17.79■□□□□ 0.44
PBX3-201ENST00000342287 HLFQ16534 295 aa17.79■□□□□ 0.44
PBX3-201ENST00000342287 MFAP1P55081 439 aaKnown RBP17.78■□□□□ 0.44
PBX3-201ENST00000342287 FOXO4P98177 505 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 TBC1D9Q6ZT07 1266 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
PBX3-201ENST00000342287 SECISBP2LQ93073 1101 aaKnown RBP17.78■□□□□ 0.44
PBX3-201ENST00000342287 AOX1Q06278 1338 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
PBX3-201ENST00000342287 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
PBX3-201ENST00000342287 SEPT12Q8IYM1 358 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 ANTXR1Q9H6X2 564 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 COPRSQ9NQ92 184 aa17.78■□□□□ 0.44
PBX3-201ENST00000342287 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
PBX3-201ENST00000342287 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
PBX3-201ENST00000342287 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
PBX3-201ENST00000342287 TBC1D2BQ9UPU7 963 aa17.77■□□□□ 0.44
PBX3-201ENST00000342287 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.43
PBX3-201ENST00000342287 TERF1P54274 439 aa17.77■□□□□ 0.43
PBX3-201ENST00000342287 ZBTB22O15209 634 aa17.76■□□□□ 0.43
PBX3-201ENST00000342287 PCCAP05165 728 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms