RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 ANP32EQ9BTT0 268 aa16.56■□□□□ 0.24
LMO1-201ENST00000335790 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
LMO1-201ENST00000335790 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
LMO1-201ENST00000335790 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
LMO1-201ENST00000335790 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
LMO1-201ENST00000335790 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
LMO1-201ENST00000335790 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
LMO1-201ENST00000335790 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
LMO1-201ENST00000335790 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
LMO1-201ENST00000335790 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMO1-201ENST00000335790 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
LMO1-201ENST00000335790 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
LMO1-201ENST00000335790 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
LMO1-201ENST00000335790 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
LMO1-201ENST00000335790 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
LMO1-201ENST00000335790 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
LMO1-201ENST00000335790 SNX21Q969T3 373 aa16.53■□□□□ 0.24
LMO1-201ENST00000335790 KIF2CQ99661 725 aa16.53■□□□□ 0.24
LMO1-201ENST00000335790 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
LMO1-201ENST00000335790 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
LMO1-201ENST00000335790 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
LMO1-201ENST00000335790 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.24
LMO1-201ENST00000335790 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
LMO1-201ENST00000335790 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
LMO1-201ENST00000335790 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
LMO1-201ENST00000335790 ZBTB1Q9Y2K1 713 aa16.52■□□□□ 0.24
LMO1-201ENST00000335790 CCDC9Q9Y3X0 531 aaKnown RBP16.52■□□□□ 0.24
LMO1-201ENST00000335790 MYH3P11055 1940 aa16.52■□□□□ 0.23
LMO1-201ENST00000335790 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 ERC2O15083 957 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 REC8O95072 547 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 CHMLP26374 656 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
LMO1-201ENST00000335790 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
LMO1-201ENST00000335790 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 SIK1P57059 783 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
LMO1-201ENST00000335790 TSHZ3Q63HK5 1081 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
LMO1-201ENST00000335790 LMBR1LQ6UX01 489 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 IL17RAQ96F46 866 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 GPATCH3Q96I76 525 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 ESYT1Q9BSJ8 1104 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 FBXO3Q9UK99 471 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 PALLDQ8WX93 1383 aa16.5■□□□□ 0.23
LMO1-201ENST00000335790 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
LMO1-201ENST00000335790 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
LMO1-201ENST00000335790 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
LMO1-201ENST00000335790 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
LMO1-201ENST00000335790 BTAF1O14981 1849 aa16.49■□□□□ 0.23
LMO1-201ENST00000335790 SBF2Q86WG5 1849 aa16.49■□□□□ 0.23
LMO1-201ENST00000335790 RGL2O15211 777 aa16.48■□□□□ 0.23
LMO1-201ENST00000335790 ONECUT3O60422 494 aaPredicted RBP16.48■□□□□ 0.23
LMO1-201ENST00000335790 CSF1RP07333 972 aa16.48■□□□□ 0.23
LMO1-201ENST00000335790 IFIT2P09913 472 aaKnown RBP16.48■□□□□ 0.23
LMO1-201ENST00000335790 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
LMO1-201ENST00000335790 JARID2Q92833 1246 aaPredicted RBP16.48■□□□□ 0.23
LMO1-201ENST00000335790 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
LMO1-201ENST00000335790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
LMO1-201ENST00000335790 LAMB2P55268 1798 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 CIAO1O76071 339 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 ITPK1Q13572 414 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 HLFQ16534 295 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 AACSQ86V21 672 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 NLRP10Q86W26 655 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 SEPT12Q8IYM1 358 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 LY75O60449 1722 aa16.47■□□□□ 0.23
LMO1-201ENST00000335790 A0A0G2JS52 829 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 ATP6V1AP38606 617 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
LMO1-201ENST00000335790 MYT1Q01538 1121 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
LMO1-201ENST00000335790 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 KLHDC4Q8TBB5 520 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 BCL11AQ9H165 835 aa16.46■□□□□ 0.23
LMO1-201ENST00000335790 LRP5O75197 1615 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 RABEP1Q15276 862 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 RILPL2Q969X0 211 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 SIL1Q9H173 461 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
LMO1-201ENST00000335790 KCNQ2O43526 872 aa16.44■□□□□ 0.22
LMO1-201ENST00000335790 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
LMO1-201ENST00000335790 EVI5LQ96CN4 794 aa16.44■□□□□ 0.22
LMO1-201ENST00000335790 AK7Q96M32 723 aa16.44■□□□□ 0.22
LMO1-201ENST00000335790 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 TAF1LQ8IZX4 1826 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 EYA2O00167 538 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 ATP5JP18859 108 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 ANAPC15P60006 121 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 TFCP2Q12800 502 aa16.43■□□□□ 0.22
LMO1-201ENST00000335790 TICAM2Q86XR7 235 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms