RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 AACSQ86V21 672 aa20.75■□□□□ 0.91
DDX41-201ENST00000330503 ZBTB1Q9Y2K1 713 aa20.75■□□□□ 0.91
DDX41-201ENST00000330503 NBR1Q14596 966 aa20.74■□□□□ 0.91
DDX41-201ENST00000330503 FAM98CQ17RN3 349 aaKnown RBP20.74■□□□□ 0.91
DDX41-201ENST00000330503 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
DDX41-201ENST00000330503 ECHDC1Q9NTX5 307 aa20.74■□□□□ 0.91
DDX41-201ENST00000330503 MAP3K15Q6ZN16 1313 aa20.74■□□□□ 0.91
DDX41-201ENST00000330503 REC8O95072 547 aa20.74■□□□□ 0.91
DDX41-201ENST00000330503 GLRX3O76003 335 aaKnown RBP20.73■□□□□ 0.91
DDX41-201ENST00000330503 HLFQ16534 295 aa20.73■□□□□ 0.91
DDX41-201ENST00000330503 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
DDX41-201ENST00000330503 GIGYF2Q6Y7W6 1299 aaKnown RBP20.72■□□□□ 0.91
DDX41-201ENST00000330503 ANTXR1Q9H6X2 564 aa20.72■□□□□ 0.91
DDX41-201ENST00000330503 ARXQ96QS3 562 aa20.71■□□□□ 0.91
DDX41-201ENST00000330503 A0A0G2JS52 829 aa20.71■□□□□ 0.91
DDX41-201ENST00000330503 CERKQ8TCT0 537 aa20.71■□□□□ 0.91
DDX41-201ENST00000330503 TLR7Q9NYK1 1049 aaKnown RBP20.71■□□□□ 0.91
DDX41-201ENST00000330503 KCNQ2O43526 872 aa20.7■□□□□ 0.9
DDX41-201ENST00000330503 HSCBQ8IWL3 235 aa20.7■□□□□ 0.9
DDX41-201ENST00000330503 CD2BP2O95400 341 aaKnown RBP20.69■□□□□ 0.9
DDX41-201ENST00000330503 IL6STP40189 918 aaPredicted RBP20.69■□□□□ 0.9
DDX41-201ENST00000330503 TFCP2Q12800 502 aa20.69■□□□□ 0.9
DDX41-201ENST00000330503 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
DDX41-201ENST00000330503 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
DDX41-201ENST00000330503 GPATCH3Q96I76 525 aa20.69■□□□□ 0.9
DDX41-201ENST00000330503 IL25Q9H293 177 aa20.69■□□□□ 0.9
DDX41-201ENST00000330503 SLKQ9H2G2 1235 aaPredicted RBP20.69■□□□□ 0.9
DDX41-201ENST00000330503 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
DDX41-201ENST00000330503 AK9Q5TCS8 1911 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 PCCAP05165 728 aaPredicted RBP20.68■□□□□ 0.9
DDX41-201ENST00000330503 ATP6V1AP38606 617 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 SIK1P57059 783 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 ITPK1Q13572 414 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 ATG9AQ7Z3C6 839 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 SPRYD3Q8NCJ5 442 aa20.68■□□□□ 0.9
DDX41-201ENST00000330503 EIF5P55010 431 aaKnown RBP20.67■□□□□ 0.9
DDX41-201ENST00000330503 NLRP10Q86W26 655 aa20.67■□□□□ 0.9
DDX41-201ENST00000330503 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
DDX41-201ENST00000330503 ERVV-1B6SEH8 477 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 RABEP1Q15276 862 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 TNNI3KQ59H18 835 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 ZBTB38Q8NAP3 1195 aaPredicted RBP20.66■□□□□ 0.9
DDX41-201ENST00000330503 CCDC87Q9NVE4 849 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 USP21Q9UK80 565 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 TBC1D2BQ9UPU7 963 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 FPGT-TNNI3KV9GXZ4 949 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 GPTP24298 496 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 PLA2G12BQ9BX93 195 aa20.66■□□□□ 0.9
DDX41-201ENST00000330503 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
DDX41-201ENST00000330503 HSP90AB3PQ58FF7 597 aa20.65■□□□□ 0.9
DDX41-201ENST00000330503 DZIP3Q86Y13 1208 aaKnown RBP20.65■□□□□ 0.9
DDX41-201ENST00000330503 SYNE4Q8N205 404 aa20.65■□□□□ 0.9
DDX41-201ENST00000330503 PALLDQ8WX93 1383 aa20.65■□□□□ 0.9
DDX41-201ENST00000330503 ZNF594Q96JF6 807 aaPredicted RBP20.65■□□□□ 0.9
DDX41-201ENST00000330503 SGSM2O43147 1006 aa20.64■□□□□ 0.89
DDX41-201ENST00000330503 ANO2Q9NQ90 1003 aa20.64■□□□□ 0.89
DDX41-201ENST00000330503 DBNLQ9UJU6 430 aaKnown RBP20.64■□□□□ 0.89
DDX41-201ENST00000330503 NUP98P52948 1817 aa20.64■□□□□ 0.89
DDX41-201ENST00000330503 CSF1RP07333 972 aa20.63■□□□□ 0.89
DDX41-201ENST00000330503 NFKBIBQ15653 356 aa20.63■□□□□ 0.89
DDX41-201ENST00000330503 SMARCC1Q92922 1105 aaPredicted RBP20.63■□□□□ 0.89
DDX41-201ENST00000330503 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
DDX41-201ENST00000330503 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
DDX41-201ENST00000330503 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
DDX41-201ENST00000330503 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 EYA2O00167 538 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 ZNF34Q8IZ26 560 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 RREB1Q92766 1687 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 CICQ96RK0 1608 aaPredicted RBP20.62■□□□□ 0.89
DDX41-201ENST00000330503 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 HSPA1LP34931 641 aa20.62■□□□□ 0.89
DDX41-201ENST00000330503 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
DDX41-201ENST00000330503 IL15P40933 162 aaPredicted RBP20.61■□□□□ 0.89
DDX41-201ENST00000330503 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
DDX41-201ENST00000330503 DBNDD2Q9BQY9 259 aa20.61■□□□□ 0.89
DDX41-201ENST00000330503 PUS3Q9BZE2 481 aaKnown RBP20.61■□□□□ 0.89
DDX41-201ENST00000330503 PALD1Q9ULE6 856 aa20.61■□□□□ 0.89
DDX41-201ENST00000330503 K7ELQ4 463 aaPredicted RBP20.6■□□□□ 0.89
DDX41-201ENST00000330503 EPB41L2O43491 1005 aaKnown RBP20.6■□□□□ 0.89
DDX41-201ENST00000330503 CIAO1O76071 339 aa20.6■□□□□ 0.89
DDX41-201ENST00000330503 ATP5JP18859 108 aa20.6■□□□□ 0.89
DDX41-201ENST00000330503 CWC27Q6UX04 472 aaKnown RBP20.6■□□□□ 0.89
DDX41-201ENST00000330503 IL17RAQ96F46 866 aa20.6■□□□□ 0.89
DDX41-201ENST00000330503 LSG1Q9H089 658 aaKnown RBP20.6■□□□□ 0.89
DDX41-201ENST00000330503 GPR108Q9NPR9 543 aa20.6■□□□□ 0.89
DDX41-201ENST00000330503 UBN2Q6ZU65 1347 aa20.59■□□□□ 0.89
DDX41-201ENST00000330503 DDIT3P35638 169 aa20.59■□□□□ 0.89
DDX41-201ENST00000330503 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
DDX41-201ENST00000330503 CCDC85AQ96PX6 553 aaPredicted RBP20.58■□□□□ 0.89
DDX41-201ENST00000330503 DIAPH3Q9NSV4 1193 aa20.58■□□□□ 0.89
DDX41-201ENST00000330503 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
DDX41-201ENST00000330503 THSD7AQ9UPZ6 1657 aa20.58■□□□□ 0.89
DDX41-201ENST00000330503 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
DDX41-201ENST00000330503 ANAPC15P60006 121 aa20.57■□□□□ 0.88
DDX41-201ENST00000330503 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
DDX41-201ENST00000330503 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
DDX41-201ENST00000330503 IRS4O14654 1257 aaPredicted RBP20.57■□□□□ 0.88
DDX41-201ENST00000330503 MCCP23508 829 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms