RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 PRAM1Q96QH2 718 aa19.28■□□□□ 0.68
PACS1-201ENST00000320580 POTEB2H3BUK9 544 aa19.27■□□□□ 0.68
PACS1-201ENST00000320580 PPFIA3O75145 1194 aa19.27■□□□□ 0.68
PACS1-201ENST00000320580 YEATS2Q9ULM3 1422 aa19.27■□□□□ 0.68
PACS1-201ENST00000320580 PPP2R3AQ06190 1150 aa19.27■□□□□ 0.68
PACS1-201ENST00000320580 GOLGA5Q8TBA6 731 aa19.27■□□□□ 0.67
PACS1-201ENST00000320580 SMARCE1Q969G3 411 aa19.27■□□□□ 0.67
PACS1-201ENST00000320580 UTP14AQ9BVJ6 771 aaKnown RBP19.27■□□□□ 0.67
PACS1-201ENST00000320580 PUF60Q9UHX1 559 aaKnown RBP19.27■□□□□ 0.67
PACS1-201ENST00000320580 FAM83GA6ND36 823 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
PACS1-201ENST00000320580 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 PNMA6AP0CW24 399 aaPredicted RBP19.26■□□□□ 0.67
PACS1-201ENST00000320580 TRIM29Q14134 588 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 CPLX2Q6PUV4 134 aaKnown RBP19.26■□□□□ 0.67
PACS1-201ENST00000320580 PCMTD1Q96MG8 357 aaPredicted RBP19.26■□□□□ 0.67
PACS1-201ENST00000320580 FEZ2Q9UHY8 353 aaPredicted RBP19.26■□□□□ 0.67
PACS1-201ENST00000320580 ARHGEF5Q12774 1597 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 HIP1O00291 1037 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 SULT6B1Q6IMI4 303 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 KCNF1Q9H3M0 494 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
PACS1-201ENST00000320580 GOLGA6L9A6NEM1 432 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 CCDC30Q5VVM6 783 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 GBP6Q6ZN66 633 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 POGZQ7Z3K3 1410 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 EBAG9O00559 213 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 EPB41L2O43491 1005 aaKnown RBP19.25■□□□□ 0.67
PACS1-201ENST00000320580 UBASH3AP57075 661 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 LTV1Q96GA3 475 aaPredicted RBP19.25■□□□□ 0.67
PACS1-201ENST00000320580 CLSTN2Q9H4D0 955 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 CTIFO43310 598 aaKnown RBP19.25■□□□□ 0.67
PACS1-201ENST00000320580 NF2P35240 595 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 STK11IPQ8N1F8 1099 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 CPLX3Q8WVH0 158 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 NOS1P29475 1434 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 NLRP1Q9C000 1473 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 FILIP1LQ4L180 1135 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 RASSF8Q8NHQ8 419 aa19.25■□□□□ 0.67
PACS1-201ENST00000320580 MAP9Q49MG5 647 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 RAI14Q9P0K7 980 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 HSP90AA4PQ58FG1 418 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 MCM10Q7L590 875 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 MRVI1Q9Y6F6 885 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 ABCC1P33527 1531 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 GLRX3O76003 335 aaKnown RBP19.24■□□□□ 0.67
PACS1-201ENST00000320580 PLCD4Q9BRC7 762 aa19.24■□□□□ 0.67
PACS1-201ENST00000320580 RHOXF2BP0C7M4 288 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 AMPHP49418 695 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 RHOXF2Q9BQY4 288 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 KARSQ15046 597 aaKnown RBP19.23■□□□□ 0.67
PACS1-201ENST00000320580 TICAM2Q86XR7 235 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 HDXQ7Z353 690 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 CABP1Q9NZU7 370 aa19.23■□□□□ 0.67
PACS1-201ENST00000320580 TRIM66O15016 1216 aa19.22■□□□□ 0.67
PACS1-201ENST00000320580 ATP2B1P20020 1258 aa19.22■□□□□ 0.67
PACS1-201ENST00000320580 DNAJC21Q5F1R6 531 aaKnown RBP19.22■□□□□ 0.67
PACS1-201ENST00000320580 CUL4AQ13619 759 aa19.22■□□□□ 0.67
PACS1-201ENST00000320580 ZCCHC17Q9NP64 241 aaKnown RBP19.22■□□□□ 0.67
PACS1-201ENST00000320580 FBLN1P23142 703 aa19.22■□□□□ 0.67
PACS1-201ENST00000320580 ATP6V1AP38606 617 aa19.22■□□□□ 0.67
PACS1-201ENST00000320580 SART3Q15020 963 aaKnown RBP19.22■□□□□ 0.67
PACS1-201ENST00000320580 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 CYP2C19P33261 490 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 GYS2P54840 703 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 LRRFIP1Q32MZ4 808 aaKnown RBP19.21■□□□□ 0.67
PACS1-201ENST00000320580 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 ANKRD65E5RJM6 399 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 AACSQ86V21 672 aa19.21■□□□□ 0.67
PACS1-201ENST00000320580 ARID5BQ14865 1188 aa19.21■□□□□ 0.66
PACS1-201ENST00000320580 TTC6Q86TZ1 520 aa19.21■□□□□ 0.66
PACS1-201ENST00000320580 ELP1O95163 1332 aa19.2■□□□□ 0.66
PACS1-201ENST00000320580 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
PACS1-201ENST00000320580 RABEP2Q9H5N1 569 aa19.2■□□□□ 0.66
PACS1-201ENST00000320580 TEFQ10587 303 aa19.2■□□□□ 0.66
PACS1-201ENST00000320580 BRF1Q92994 677 aa19.2■□□□□ 0.66
PACS1-201ENST00000320580 ACTN2P35609 894 aa19.2■□□□□ 0.66
PACS1-201ENST00000320580 NAP1L1P55209 391 aaKnown RBP19.19■□□□□ 0.66
PACS1-201ENST00000320580 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
PACS1-201ENST00000320580 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
PACS1-201ENST00000320580 CEP57Q86XR8 500 aa19.19■□□□□ 0.66
PACS1-201ENST00000320580 TEX2Q8IWB9 1127 aa19.19■□□□□ 0.66
PACS1-201ENST00000320580 ETF1P62495 437 aaKnown RBP19.19■□□□□ 0.66
PACS1-201ENST00000320580 DHX16O60231 1041 aaKnown RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 LEO1Q8WVC0 666 aaPredicted RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 SNX14Q9Y5W7 946 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 CCDC148Q8NFR7 591 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 CTAGE15A4D2H0 777 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 TULP1O00294 542 aaPredicted RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 CTAGE8P0CG41 777 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 RRS1Q15050 365 aaKnown RBP19.18■□□□□ 0.66
PACS1-201ENST00000320580 CTAGE6Q86UF2 777 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 CTAGE4Q8IX94 777 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 BRMS1Q9HCU9 246 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 MTMR6Q9Y217 621 aa19.18■□□□□ 0.66
PACS1-201ENST00000320580 ERLIN2O94905 339 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms