RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CHMLP26374 656 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 TIMM10P62072 90 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 TFCP2Q12800 502 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 MPNDQ8N594 471 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 NEUROD6Q96NK8 337 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 ZBTB1Q9Y2K1 713 aa9.25□□□□□ -0.93
TRIM55-202ENST00000315962 SALL3Q9BXA9 1300 aa9.24□□□□□ -0.93
TRIM55-202ENST00000315962 LMO7Q8WWI1 1683 aa9.24□□□□□ -0.93
TRIM55-202ENST00000315962 ERC2O15083 957 aa9.24□□□□□ -0.93
TRIM55-202ENST00000315962 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
TRIM55-202ENST00000315962 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
TRIM55-202ENST00000315962 MCTP1Q6DN14 999 aa9.24□□□□□ -0.93
TRIM55-202ENST00000315962 DDX49Q9Y6V7 483 aaKnown RBP9.24□□□□□ -0.93
TRIM55-202ENST00000315962 TOM1O60784 492 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 CPA1P15085 419 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 MARCH10Q8NA82 808 aaPredicted RBP9.23□□□□□ -0.93
TRIM55-202ENST00000315962 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
TRIM55-202ENST00000315962 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
TRIM55-202ENST00000315962 RAB11FIP3O75154 756 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 NEK4P51957 841 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 LRRC24Q50LG9 513 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
TRIM55-202ENST00000315962 ESYT1Q9BSJ8 1104 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
TRIM55-202ENST00000315962 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
TRIM55-202ENST00000315962 CAVIN1Q6NZI2 390 aaKnown RBP9.22□□□□□ -0.93
TRIM55-202ENST00000315962 CWC25Q9NXE8 425 aaPredicted RBP9.22□□□□□ -0.93
TRIM55-202ENST00000315962 KDM3BQ7LBC6 1761 aa9.22□□□□□ -0.93
TRIM55-202ENST00000315962 STARD3NLO95772 234 aa9.22□□□□□ -0.93
TRIM55-202ENST00000315962 FAM227BQ96M60 508 aa9.22□□□□□ -0.93
TRIM55-202ENST00000315962 GBP4Q96PP9 640 aa9.22□□□□□ -0.93
TRIM55-202ENST00000315962 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-202ENST00000315962 REC8O95072 547 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 ATP6V1AP38606 617 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 RAB3GAP1Q15042 981 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 ZGPATQ8N5A5 531 aaKnown RBP9.21□□□□□ -0.93
TRIM55-202ENST00000315962 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 ECHDC1Q9NTX5 307 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 DDIT3P35638 169 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 MTX1Q13505 466 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 COL9A3Q14050 684 aaPredicted RBP9.21□□□□□ -0.93
TRIM55-202ENST00000315962 STAP2Q9UGK3 403 aa9.21□□□□□ -0.93
TRIM55-202ENST00000315962 ROBO1Q9Y6N7 1651 aa9.21□□□□□ -0.94
TRIM55-202ENST00000315962 SNAP23O00161 211 aa9.21□□□□□ -0.94
TRIM55-202ENST00000315962 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.94
TRIM55-202ENST00000315962 FOXO4P98177 505 aa9.21□□□□□ -0.94
TRIM55-202ENST00000315962 HSP90AB4PQ58FF6 505 aa9.21□□□□□ -0.94
TRIM55-202ENST00000315962 DBNLQ9UJU6 430 aaKnown RBP9.21□□□□□ -0.94
TRIM55-202ENST00000315962 SPATA31A1Q5TZJ5 1347 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 BICDL1Q6ZP65 573 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 DDX46Q7L014 1031 aaKnown RBP9.2□□□□□ -0.94
TRIM55-202ENST00000315962 CCDC24Q8N4L8 307 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 SNRKQ9NRH2 765 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 C5P01031 1676 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
TRIM55-202ENST00000315962 PTH1RQ03431 593 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 KIF6Q6ZMV9 814 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 CNTROBQ8N137 903 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 RNF214Q8ND24 703 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 DIAPH3Q9NSV4 1193 aa9.2□□□□□ -0.94
TRIM55-202ENST00000315962 PXDNLA1KZ92 1463 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 BAG4O95429 457 aaKnown RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 HCLS1P14317 486 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 RFX5P48382 616 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 CASP7P55210 303 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 RASEFQ8IZ41 740 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 HELBQ8NG08 1087 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 TCEANC2Q96MN5 208 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 SEC62Q99442 399 aaKnown RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 FSD1Q9BTV5 496 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 UTYO14607 1347 aa9.19□□□□□ -0.94
TRIM55-202ENST00000315962 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 TRMT112Q9UI30 125 aaKnown RBP9.19□□□□□ -0.94
TRIM55-202ENST00000315962 H7C1W4 665 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 TCIRG1Q13488 830 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 CCDC129Q6ZRS4 1044 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
TRIM55-202ENST00000315962 PRPF40AO75400 957 aaKnown RBP9.18□□□□□ -0.94
TRIM55-202ENST00000315962 ITPK1Q13572 414 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 HSP90AB3PQ58FF7 597 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 TNNI3KQ59H18 835 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 TAF7LQ5H9L4 462 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 PI16Q6UXB8 463 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 NSFL1CQ9UNZ2 370 aaKnown RBP9.18□□□□□ -0.94
TRIM55-202ENST00000315962 TAF6LQ9Y6J9 622 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 FPGT-TNNI3KV9GXZ4 949 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 SCN11AQ9UI33 1791 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 KCNJ4P48050 445 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRIM55-202ENST00000315962 CCDC57Q2TAC2 916 aa9.18□□□□□ -0.94
TRIM55-202ENST00000315962 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
TRIM55-202ENST00000315962 LOC102724428A0A0B4J2F2 783 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 A0A0D9SFI3 127 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 CRKLP46109 303 aaKnown RBP9.17□□□□□ -0.94
TRIM55-202ENST00000315962 SIK1P57059 783 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 ERC1Q8IUD2 1116 aa9.17□□□□□ -0.94
TRIM55-202ENST00000315962 CCDC191Q8NCU4 936 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms