RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 BCL9LQ86UU0 1499 aa25.99■■□□□ 1.75
ATG4D-201ENST00000309469 HSCBQ8IWL3 235 aa25.98■■□□□ 1.75
ATG4D-201ENST00000309469 MAP3K15Q6ZN16 1313 aa25.98■■□□□ 1.75
ATG4D-201ENST00000309469 RTL5Q5HYW3 569 aaPredicted RBP25.98■■□□□ 1.75
ATG4D-201ENST00000309469 EAF2Q96CJ1 260 aaPredicted RBP25.98■■□□□ 1.75
ATG4D-201ENST00000309469 MAP4K4O95819 1239 aaPredicted RBP25.97■■□□□ 1.75
ATG4D-201ENST00000309469 ZBTB1Q9Y2K1 713 aa25.97■■□□□ 1.75
ATG4D-201ENST00000309469 A0A0G2JS52 829 aa25.96■■□□□ 1.75
ATG4D-201ENST00000309469 FAM98CQ17RN3 349 aaKnown RBP25.96■■□□□ 1.75
ATG4D-201ENST00000309469 CNTROBQ8N137 903 aa25.96■■□□□ 1.75
ATG4D-201ENST00000309469 FNBP4Q8N3X1 1017 aaPredicted RBP25.96■■□□□ 1.75
ATG4D-201ENST00000309469 ARXQ96QS3 562 aa25.96■■□□□ 1.75
ATG4D-201ENST00000309469 TJP1Q07157 1748 aa25.96■■□□□ 1.75
ATG4D-201ENST00000309469 GIGYF2Q6Y7W6 1299 aaKnown RBP25.95■■□□□ 1.74
ATG4D-201ENST00000309469 SPATA31A6Q5VVP1 1343 aa25.95■■□□□ 1.74
ATG4D-201ENST00000309469 CCDC8Q9H0W5 538 aaPredicted RBP25.94■■□□□ 1.74
ATG4D-201ENST00000309469 IL6STP40189 918 aaPredicted RBP25.94■■□□□ 1.74
ATG4D-201ENST00000309469 CHMP3Q9Y3E7 222 aa25.93■■□□□ 1.74
ATG4D-201ENST00000309469 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.93■■□□□ 1.74
ATG4D-201ENST00000309469 HLFQ16534 295 aa25.92■■□□□ 1.74
ATG4D-201ENST00000309469 CERKQ8TCT0 537 aa25.92■■□□□ 1.74
ATG4D-201ENST00000309469 HSP90AB3PQ58FF7 597 aa25.92■■□□□ 1.74
ATG4D-201ENST00000309469 SLKQ9H2G2 1235 aaPredicted RBP25.92■■□□□ 1.74
ATG4D-201ENST00000309469 PCCAP05165 728 aaPredicted RBP25.91■■□□□ 1.74
ATG4D-201ENST00000309469 RABEP1Q15276 862 aa25.91■■□□□ 1.74
ATG4D-201ENST00000309469 ANTXR1Q9H6X2 564 aa25.91■■□□□ 1.74
ATG4D-201ENST00000309469 KAT6BQ8WYB5 2073 aa25.91■■□□□ 1.74
ATG4D-201ENST00000309469 LOC102724428A0A0B4J2F2 783 aa25.9■■□□□ 1.74
ATG4D-201ENST00000309469 ATP6V1AP38606 617 aa25.9■■□□□ 1.74
ATG4D-201ENST00000309469 SIK1P57059 783 aa25.9■■□□□ 1.74
ATG4D-201ENST00000309469 TFCP2Q12800 502 aa25.9■■□□□ 1.74
ATG4D-201ENST00000309469 TLR7Q9NYK1 1049 aaKnown RBP25.9■■□□□ 1.74
ATG4D-201ENST00000309469 ERVV-1B6SEH8 477 aa25.89■■□□□ 1.74
ATG4D-201ENST00000309469 ZBTB38Q8NAP3 1195 aaPredicted RBP25.89■■□□□ 1.74
ATG4D-201ENST00000309469 USP21Q9UK80 565 aa25.89■■□□□ 1.74
ATG4D-201ENST00000309469 TNNI3KQ59H18 835 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 INTS5Q6P9B9 1019 aaKnown RBP25.88■■□□□ 1.73
ATG4D-201ENST00000309469 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
ATG4D-201ENST00000309469 SMARCC1Q92922 1105 aaPredicted RBP25.88■■□□□ 1.73
ATG4D-201ENST00000309469 FPGT-TNNI3KV9GXZ4 949 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 KCNQ2O43526 872 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 NLRP10Q86W26 655 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 SPRYD3Q8NCJ5 442 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 ANO2Q9NQ90 1003 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
ATG4D-201ENST00000309469 EVI5LQ96CN4 794 aa25.87■■□□□ 1.73
ATG4D-201ENST00000309469 FAM89AQ96GI7 184 aa25.87■■□□□ 1.73
ATG4D-201ENST00000309469 PLA2G12BQ9BX93 195 aa25.87■■□□□ 1.73
ATG4D-201ENST00000309469 PALLDQ8WX93 1383 aa25.87■■□□□ 1.73
ATG4D-201ENST00000309469 CD2BP2O95400 341 aaKnown RBP25.86■■□□□ 1.73
ATG4D-201ENST00000309469 GPTP24298 496 aa25.86■■□□□ 1.73
ATG4D-201ENST00000309469 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
ATG4D-201ENST00000309469 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
ATG4D-201ENST00000309469 EPB41L2O43491 1005 aaKnown RBP25.86■■□□□ 1.73
ATG4D-201ENST00000309469 CRKLP46109 303 aaKnown RBP25.86■■□□□ 1.73
ATG4D-201ENST00000309469 ITPK1Q13572 414 aa25.86■■□□□ 1.73
ATG4D-201ENST00000309469 ATG9AQ7Z3C6 839 aa25.86■■□□□ 1.73
ATG4D-201ENST00000309469 IL25Q9H293 177 aa25.85■■□□□ 1.73
ATG4D-201ENST00000309469 SGSM2O43147 1006 aa25.84■■□□□ 1.73
ATG4D-201ENST00000309469 MCCP23508 829 aa25.84■■□□□ 1.73
ATG4D-201ENST00000309469 CDHR2Q9BYE9 1310 aa25.84■■□□□ 1.73
ATG4D-201ENST00000309469 IL15P40933 162 aaPredicted RBP25.84■■□□□ 1.73
ATG4D-201ENST00000309469 DBNLQ9UJU6 430 aaKnown RBP25.84■■□□□ 1.73
ATG4D-201ENST00000309469 K7ELQ4 463 aaPredicted RBP25.83■■□□□ 1.73
ATG4D-201ENST00000309469 NFKBIBQ15653 356 aa25.83■■□□□ 1.73
ATG4D-201ENST00000309469 EYA2O00167 538 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 CIAO1O76071 339 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 CSF1RP07333 972 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 ZNF594Q96JF6 807 aaPredicted RBP25.82■■□□□ 1.72
ATG4D-201ENST00000309469 BOLA2Q9H3K6 86 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 DIAPH3Q9NSV4 1193 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 CCDC57Q2TAC2 916 aa25.82■■□□□ 1.72
ATG4D-201ENST00000309469 AK9Q5TCS8 1911 aa25.81■■□□□ 1.72
ATG4D-201ENST00000309469 ATP5JP18859 108 aa25.81■■□□□ 1.72
ATG4D-201ENST00000309469 CWC27Q6UX04 472 aaKnown RBP25.81■■□□□ 1.72
ATG4D-201ENST00000309469 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
ATG4D-201ENST00000309469 GPR108Q9NPR9 543 aa25.81■■□□□ 1.72
ATG4D-201ENST00000309469 ZNF34Q8IZ26 560 aa25.8■■□□□ 1.72
ATG4D-201ENST00000309469 RUFY2Q8WXA3 655 aa25.8■■□□□ 1.72
ATG4D-201ENST00000309469 CICQ96RK0 1608 aaPredicted RBP25.8■■□□□ 1.72
ATG4D-201ENST00000309469 ANAPC15P60006 121 aa25.8■■□□□ 1.72
ATG4D-201ENST00000309469 LRRC24Q50LG9 513 aa25.8■■□□□ 1.72
ATG4D-201ENST00000309469 SYNE4Q8N205 404 aa25.8■■□□□ 1.72
ATG4D-201ENST00000309469 HSPA1LP34931 641 aa25.79■■□□□ 1.72
ATG4D-201ENST00000309469 MEX3CQ5U5Q3 659 aaKnown RBP25.79■■□□□ 1.72
ATG4D-201ENST00000309469 DBNDD2Q9BQY9 259 aa25.79■■□□□ 1.72
ATG4D-201ENST00000309469 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
ATG4D-201ENST00000309469 FBXO3Q9UK99 471 aa25.78■■□□□ 1.72
ATG4D-201ENST00000309469 HIP1O00291 1037 aa25.78■■□□□ 1.72
ATG4D-201ENST00000309469 RREB1Q92766 1687 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 ST18O60284 1047 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 KIAA1211Q6ZU35 1233 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 IL17RAQ96F46 866 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 PUS3Q9BZE2 481 aaKnown RBP25.77■■□□□ 1.72
ATG4D-201ENST00000309469 LSG1Q9H089 658 aaKnown RBP25.77■■□□□ 1.72
ATG4D-201ENST00000309469 CHMP5Q9NZZ3 219 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 PALD1Q9ULE6 856 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 UBN2Q6ZU65 1347 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 ANKRD36CQ5JPF3 1778 aa25.77■■□□□ 1.72
ATG4D-201ENST00000309469 IRS4O14654 1257 aaPredicted RBP25.76■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms