RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 SURF6O75683 361 aaKnown RBP14.67□□□□□ -0.06
TRIM40-205ENST00000307859 HSP90AB4PQ58FF6 505 aa14.67□□□□□ -0.06
TRIM40-205ENST00000307859 TTLL7Q6ZT98 887 aa14.67□□□□□ -0.06
TRIM40-205ENST00000307859 DNAJC10Q8IXB1 793 aa14.67□□□□□ -0.06
TRIM40-205ENST00000307859 MARCH10Q8NA82 808 aaPredicted RBP14.67□□□□□ -0.06
TRIM40-205ENST00000307859 PRIM1P49642 420 aaKnown RBP14.66□□□□□ -0.06
TRIM40-205ENST00000307859 PDE1AP54750 535 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 MYH3P11055 1940 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 MYH14Q7Z406 1995 aaKnown RBP14.66□□□□□ -0.06
TRIM40-205ENST00000307859 CDC45O75419 566 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 STARD3NLO95772 234 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 KIF1BPQ96EK5 621 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 SLC4A9Q96Q91 983 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
TRIM40-205ENST00000307859 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
TRIM40-205ENST00000307859 AOX1Q06278 1338 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 HSPA6P17066 643 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 CASP7P55210 303 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 TBC1D9Q6ZT07 1266 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
TRIM40-205ENST00000307859 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
TRIM40-205ENST00000307859 SBF2Q86WG5 1849 aa14.64□□□□□ -0.07
TRIM40-205ENST00000307859 CYP19A1P11511 503 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-205ENST00000307859 MX1P20591 662 aa14.64□□□□□ -0.07
TRIM40-205ENST00000307859 SYTL4Q96C24 671 aaPredicted RBP14.64□□□□□ -0.07
TRIM40-205ENST00000307859 NHSQ6T4R5 1651 aa14.64□□□□□ -0.07
TRIM40-205ENST00000307859 ATP5J2-PTCD1G3V325 749 aa14.63□□□□□ -0.07
TRIM40-205ENST00000307859 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
TRIM40-205ENST00000307859 RABL6Q3YEC7 729 aaPredicted RBP14.63□□□□□ -0.07
TRIM40-205ENST00000307859 BTAF1O14981 1849 aa14.63□□□□□ -0.07
TRIM40-205ENST00000307859 H7C1W4 665 aa14.63□□□□□ -0.07
TRIM40-205ENST00000307859 SDSP20132 328 aa14.63□□□□□ -0.07
TRIM40-205ENST00000307859 ERC1Q8IUD2 1116 aa14.63□□□□□ -0.07
TRIM40-205ENST00000307859 A0A087WZG4 1122 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
TRIM40-205ENST00000307859 EPHA10Q5JZY3 1008 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 UBE3BQ7Z3V4 1068 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 CCDC191Q8NCU4 936 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 ISCA1Q9BUE6 129 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 C22orf23Q9BZE7 217 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 IL1RAPL2Q9NP60 686 aa14.62□□□□□ -0.07
TRIM40-205ENST00000307859 CWC25Q9NXE8 425 aaPredicted RBP14.62□□□□□ -0.07
TRIM40-205ENST00000307859 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
TRIM40-205ENST00000307859 PTF1AQ7RTS3 328 aa14.61□□□□□ -0.07
TRIM40-205ENST00000307859 BCL11AQ9H165 835 aa14.61□□□□□ -0.07
TRIM40-205ENST00000307859 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
TRIM40-205ENST00000307859 UTRNP46939 3433 aa14.61□□□□□ -0.07
TRIM40-205ENST00000307859 MAP3K15Q6ZN16 1313 aa14.6□□□□□ -0.07
TRIM40-205ENST00000307859 RBM25P49756 843 aaKnown RBP14.6□□□□□ -0.07
TRIM40-205ENST00000307859 TRIM28Q13263 835 aaKnown RBP14.6□□□□□ -0.07
TRIM40-205ENST00000307859 TCIRG1Q13488 830 aa14.6□□□□□ -0.07
TRIM40-205ENST00000307859 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
TRIM40-205ENST00000307859 PA2G4Q9UQ80 394 aaKnown RBP14.6□□□□□ -0.07
TRIM40-205ENST00000307859 GRIN3BO60391 1043 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 ACSBG1Q96GR2 724 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 IL6STP40189 918 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-205ENST00000307859 RFX5P48382 616 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-205ENST00000307859 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
TRIM40-205ENST00000307859 ERICH6Q7L0X2 663 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 NUTM1Q86Y26 1132 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 COPRSQ9NQ92 184 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 LY75O60449 1722 aa14.59□□□□□ -0.07
TRIM40-205ENST00000307859 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
TRIM40-205ENST00000307859 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
TRIM40-205ENST00000307859 FOXO4P98177 505 aa14.58□□□□□ -0.08
TRIM40-205ENST00000307859 TSHZ3Q63HK5 1081 aa14.58□□□□□ -0.08
TRIM40-205ENST00000307859 CLASRPQ8N2M8 674 aaKnown RBP14.58□□□□□ -0.08
TRIM40-205ENST00000307859 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
TRIM40-205ENST00000307859 JARID2Q92833 1246 aaPredicted RBP14.58□□□□□ -0.08
TRIM40-205ENST00000307859 LAMB2P55268 1798 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 TTC41PQ6P2S7 1318 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 SASH1O94885 1247 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 SIK1P57059 783 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 G3BP1Q13283 466 aaKnown RBP eCLIP14.57□□□□□ -0.08
TRIM40-205ENST00000307859 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 GIGYF2Q6Y7W6 1299 aaKnown RBP14.57□□□□□ -0.08
TRIM40-205ENST00000307859 SLC16A10Q8TF71 515 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 SMARCC1Q92922 1105 aaPredicted RBP14.57□□□□□ -0.08
TRIM40-205ENST00000307859 CEP350Q5VT06 3117 aa14.57□□□□□ -0.08
TRIM40-205ENST00000307859 HSP90AB3PQ58FF7 597 aa14.56□□□□□ -0.08
TRIM40-205ENST00000307859 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
TRIM40-205ENST00000307859 ERVV-1B6SEH8 477 aa14.55□□□□□ -0.08
TRIM40-205ENST00000307859 PTPN12Q05209 780 aaKnown RBP14.55□□□□□ -0.08
TRIM40-205ENST00000307859 INTS5Q6P9B9 1019 aaKnown RBP14.55□□□□□ -0.08
TRIM40-205ENST00000307859 CCDC87Q9NVE4 849 aa14.55□□□□□ -0.08
TRIM40-205ENST00000307859 PCCAP05165 728 aaPredicted RBP14.55□□□□□ -0.08
TRIM40-205ENST00000307859 POLD1P28340 1107 aa14.55□□□□□ -0.08
TRIM40-205ENST00000307859 ATP6V1AP38606 617 aa14.55□□□□□ -0.08
TRIM40-205ENST00000307859 EIF5P55010 431 aaKnown RBP14.55□□□□□ -0.08
TRIM40-205ENST00000307859 LMBR1LQ6UX01 489 aa14.55□□□□□ -0.08
TRIM40-205ENST00000307859 GPBP1L1Q9HC44 474 aaPredicted RBP14.55□□□□□ -0.08
TRIM40-205ENST00000307859 SCN7AQ01118 1682 aa14.54□□□□□ -0.08
TRIM40-205ENST00000307859 ITPK1Q13572 414 aa14.54□□□□□ -0.08
TRIM40-205ENST00000307859 BECN1Q14457 450 aa14.54□□□□□ -0.08
TRIM40-205ENST00000307859 KLHDC4Q8TBB5 520 aa14.54□□□□□ -0.08
TRIM40-205ENST00000307859 PLA2G12BQ9BX93 195 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms