RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 JCADQ9P266 1359 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 ZBTB1Q9Y2K1 713 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 HLFQ16534 295 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 AACSQ86V21 672 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 ACSBG1Q96GR2 724 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 TLR7Q9NYK1 1049 aaKnown RBP16.63■□□□□ 0.25
CHMP4C-201ENST00000297265 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
CHMP4C-201ENST00000297265 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
CHMP4C-201ENST00000297265 REC8O95072 547 aa16.62■□□□□ 0.25
CHMP4C-201ENST00000297265 GIGYF2Q6Y7W6 1299 aaKnown RBP16.62■□□□□ 0.25
CHMP4C-201ENST00000297265 VPS72Q15906 364 aa16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 CCDC8Q9H0W5 538 aaPredicted RBP16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 SLKQ9H2G2 1235 aaPredicted RBP16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 CCDC9Q9Y3X0 531 aaKnown RBP16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
CHMP4C-201ENST00000297265 KCNQ2O43526 872 aa16.6■□□□□ 0.25
CHMP4C-201ENST00000297265 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
CHMP4C-201ENST00000297265 NGLY1Q96IV0 654 aa16.6■□□□□ 0.25
CHMP4C-201ENST00000297265 TFCP2Q12800 502 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 DDIT3P35638 169 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 NFKBIBQ15653 356 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 HSCBQ8IWL3 235 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
CHMP4C-201ENST00000297265 NUP98P52948 1817 aa16.58■□□□□ 0.25
CHMP4C-201ENST00000297265 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.25
CHMP4C-201ENST00000297265 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
CHMP4C-201ENST00000297265 ITPK1Q13572 414 aa16.58■□□□□ 0.24
CHMP4C-201ENST00000297265 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
CHMP4C-201ENST00000297265 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 SGSM2O43147 1006 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 PCCAP05165 728 aaPredicted RBP16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 EIF5P55010 431 aaKnown RBP16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 SIK1P57059 783 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 RABEP1Q15276 862 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 TNNI3KQ59H18 835 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 FAM89AQ96GI7 184 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 DBNLQ9UJU6 430 aaKnown RBP16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 FPGT-TNNI3KV9GXZ4 949 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 RREB1Q92766 1687 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 ANKRD36CQ5JPF3 1778 aa16.57■□□□□ 0.24
CHMP4C-201ENST00000297265 NLRP10Q86W26 655 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 ZBTB38Q8NAP3 1195 aaPredicted RBP16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 ERVV-1B6SEH8 477 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 CSF1RP07333 972 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
CHMP4C-201ENST00000297265 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
CHMP4C-201ENST00000297265 GPATCH3Q96I76 525 aa16.55■□□□□ 0.24
CHMP4C-201ENST00000297265 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
CHMP4C-201ENST00000297265 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
CHMP4C-201ENST00000297265 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 CERKQ8TCT0 537 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 ARXQ96QS3 562 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 GPTP24298 496 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 PTF1AQ7RTS3 328 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 ZNF34Q8IZ26 560 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 BOLA2Q9H3K6 86 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
CHMP4C-201ENST00000297265 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
CHMP4C-201ENST00000297265 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
CHMP4C-201ENST00000297265 EYA2O00167 538 aa16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 ATP5JP18859 108 aa16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 CWC27Q6UX04 472 aaKnown RBP16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 DBNDD2Q9BQY9 259 aa16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 USP21Q9UK80 565 aa16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
CHMP4C-201ENST00000297265 CIAO1O76071 339 aa16.52■□□□□ 0.23
CHMP4C-201ENST00000297265 HSPA4P34932 840 aa16.52■□□□□ 0.23
CHMP4C-201ENST00000297265 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
CHMP4C-201ENST00000297265 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
CHMP4C-201ENST00000297265 A0A0G2JS52 829 aa16.51■□□□□ 0.23
CHMP4C-201ENST00000297265 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
CHMP4C-201ENST00000297265 GPR108Q9NPR9 543 aa16.51■□□□□ 0.23
CHMP4C-201ENST00000297265 ANAPC15P60006 121 aa16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 TIMM10P62072 90 aa16.5■□□□□ 0.23
CHMP4C-201ENST00000297265 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms