RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 VPS72Q15906 364 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 RILPL2Q969X0 211 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
C9orf43-201ENST00000288462 MYH3P11055 1940 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
C9orf43-201ENST00000288462 AACSQ86V21 672 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 KLHDC4Q8TBB5 520 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 SIL1Q9H173 461 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 SPATA31A6Q5VVP1 1343 aa12.44□□□□□ -0.42
C9orf43-201ENST00000288462 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
C9orf43-201ENST00000288462 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
C9orf43-201ENST00000288462 NBR1Q14596 966 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 RABEP1Q15276 862 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 LMBR1LQ6UX01 489 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
C9orf43-201ENST00000288462 ZBTB1Q9Y2K1 713 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
C9orf43-201ENST00000288462 BCORQ6W2J9 1755 aa12.43□□□□□ -0.42
C9orf43-201ENST00000288462 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
C9orf43-201ENST00000288462 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
C9orf43-201ENST00000288462 MYH14Q7Z406 1995 aaKnown RBP12.42□□□□□ -0.42
C9orf43-201ENST00000288462 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
C9orf43-201ENST00000288462 MYT1Q01538 1121 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
C9orf43-201ENST00000288462 LAMB2P55268 1798 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 PCCAP05165 728 aaPredicted RBP12.41□□□□□ -0.42
C9orf43-201ENST00000288462 HSP90AB3PQ58FF7 597 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
C9orf43-201ENST00000288462 TLR7Q9NYK1 1049 aaKnown RBP12.41□□□□□ -0.42
C9orf43-201ENST00000288462 CD2BP2O95400 341 aaKnown RBP12.4□□□□□ -0.42
C9orf43-201ENST00000288462 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
C9orf43-201ENST00000288462 ACSBG1Q96GR2 724 aa12.4□□□□□ -0.42
C9orf43-201ENST00000288462 NGLY1Q96IV0 654 aa12.4□□□□□ -0.42
C9orf43-201ENST00000288462 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
C9orf43-201ENST00000288462 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
C9orf43-201ENST00000288462 PALLDQ8WX93 1383 aa12.4□□□□□ -0.42
C9orf43-201ENST00000288462 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.43
C9orf43-201ENST00000288462 TNNI3KQ59H18 835 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 CCDC8Q9H0W5 538 aaPredicted RBP12.4□□□□□ -0.43
C9orf43-201ENST00000288462 IL25Q9H293 177 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 LRP5O75197 1615 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 BTAF1O14981 1849 aa12.4□□□□□ -0.43
C9orf43-201ENST00000288462 ZNF609O15014 1411 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
C9orf43-201ENST00000288462 SGSM2O43147 1006 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 TFCP2Q12800 502 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 ZBTB38Q8NAP3 1195 aaPredicted RBP12.39□□□□□ -0.43
C9orf43-201ENST00000288462 EVI5LQ96CN4 794 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
C9orf43-201ENST00000288462 LOC102724428A0A0B4J2F2 783 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 DDIT3P35638 169 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
C9orf43-201ENST00000288462 SIK1P57059 783 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 ANAPC15P60006 121 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 HLFQ16534 295 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
C9orf43-201ENST00000288462 INTS5Q6P9B9 1019 aaKnown RBP12.38□□□□□ -0.43
C9orf43-201ENST00000288462 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
C9orf43-201ENST00000288462 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
C9orf43-201ENST00000288462 RAD50Q92878 1312 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 SPEF2Q9C093 1822 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 CIAO1O76071 339 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 CERKQ8TCT0 537 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 GPR108Q9NPR9 543 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
C9orf43-201ENST00000288462 MCCP23508 829 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 IL15P40933 162 aaPredicted RBP12.37□□□□□ -0.43
C9orf43-201ENST00000288462 ITPK1Q13572 414 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
C9orf43-201ENST00000288462 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
C9orf43-201ENST00000288462 RFX7Q2KHR2 1363 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 EYA2O00167 538 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 CSF1RP07333 972 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 ATP5JP18859 108 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 ATP6V1AP38606 617 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 CRKLP46109 303 aaKnown RBP12.37□□□□□ -0.43
C9orf43-201ENST00000288462 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 SBF2Q86WG5 1849 aa12.37□□□□□ -0.43
C9orf43-201ENST00000288462 ZNF34Q8IZ26 560 aa12.36□□□□□ -0.43
C9orf43-201ENST00000288462 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
C9orf43-201ENST00000288462 LSG1Q9H089 658 aaKnown RBP12.36□□□□□ -0.43
C9orf43-201ENST00000288462 LY75O60449 1722 aa12.36□□□□□ -0.43
C9orf43-201ENST00000288462 HIP1O00291 1037 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 KCNQ2O43526 872 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 CHMP5Q9NZZ3 219 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 USP21Q9UK80 565 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 PALD1Q9ULE6 856 aa12.35□□□□□ -0.43
C9orf43-201ENST00000288462 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms