RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NLRP10Q86W26 655 aa20.19■□□□□ 0.82
TPM1-201ENST00000267996 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
TPM1-201ENST00000267996 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
TPM1-201ENST00000267996 AOX1Q06278 1338 aa20.18■□□□□ 0.82
TPM1-201ENST00000267996 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
TPM1-201ENST00000267996 ZBTB38Q8NAP3 1195 aaPredicted RBP20.18■□□□□ 0.82
TPM1-201ENST00000267996 ARXQ96QS3 562 aa20.18■□□□□ 0.82
TPM1-201ENST00000267996 PLA2G12BQ9BX93 195 aa20.18■□□□□ 0.82
TPM1-201ENST00000267996 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
TPM1-201ENST00000267996 MX1P20591 662 aa20.17■□□□□ 0.82
TPM1-201ENST00000267996 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
TPM1-201ENST00000267996 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
TPM1-201ENST00000267996 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
TPM1-201ENST00000267996 LMBR1LQ6UX01 489 aa20.17■□□□□ 0.82
TPM1-201ENST00000267996 LY75O60449 1722 aa20.17■□□□□ 0.82
TPM1-201ENST00000267996 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
TPM1-201ENST00000267996 PTPN12Q05209 780 aaKnown RBP20.16■□□□□ 0.82
TPM1-201ENST00000267996 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
TPM1-201ENST00000267996 OS9Q13438 667 aaPredicted RBP20.16■□□□□ 0.82
TPM1-201ENST00000267996 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
TPM1-201ENST00000267996 CDHR2Q9BYE9 1310 aa20.16■□□□□ 0.82
TPM1-201ENST00000267996 SASH1O94885 1247 aa20.16■□□□□ 0.82
TPM1-201ENST00000267996 BRWD3Q6RI45 1802 aa20.16■□□□□ 0.82
TPM1-201ENST00000267996 USP42Q9H9J4 1324 aaKnown RBP20.15■□□□□ 0.82
TPM1-201ENST00000267996 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
TPM1-201ENST00000267996 TUBGCP6Q96RT7 1819 aa20.14■□□□□ 0.82
TPM1-201ENST00000267996 RGL2O15211 777 aa20.14■□□□□ 0.81
TPM1-201ENST00000267996 SDSP20132 328 aa20.14■□□□□ 0.81
TPM1-201ENST00000267996 GPTP24298 496 aa20.14■□□□□ 0.81
TPM1-201ENST00000267996 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
TPM1-201ENST00000267996 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.81
TPM1-201ENST00000267996 FAM196AQ6ZSG2 479 aa20.14■□□□□ 0.81
TPM1-201ENST00000267996 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
TPM1-201ENST00000267996 CDC45O75419 566 aa20.13■□□□□ 0.81
TPM1-201ENST00000267996 CLASRPQ8N2M8 674 aaKnown RBP20.13■□□□□ 0.81
TPM1-201ENST00000267996 KLHDC4Q8TBB5 520 aa20.13■□□□□ 0.81
TPM1-201ENST00000267996 UBN2Q6ZU65 1347 aa20.13■□□□□ 0.81
TPM1-201ENST00000267996 TBC1D9Q6ZT07 1266 aa20.13■□□□□ 0.81
TPM1-201ENST00000267996 FAM89AQ96GI7 184 aa20.13■□□□□ 0.81
TPM1-201ENST00000267996 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
TPM1-201ENST00000267996 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
TPM1-201ENST00000267996 CSF1RP07333 972 aa20.12■□□□□ 0.81
TPM1-201ENST00000267996 KCNQ4P56696 695 aa20.12■□□□□ 0.81
TPM1-201ENST00000267996 NUTM1Q86Y26 1132 aa20.12■□□□□ 0.81
TPM1-201ENST00000267996 TAF1LQ8IZX4 1826 aa20.11■□□□□ 0.81
TPM1-201ENST00000267996 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
TPM1-201ENST00000267996 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
TPM1-201ENST00000267996 TSHZ3Q63HK5 1081 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 CLEC4GQ6UXB4 293 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 PI4K2BQ8TCG2 481 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 TBC1D32Q96NH3 1257 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 SIL1Q9H173 461 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
TPM1-201ENST00000267996 TTC41PQ6P2S7 1318 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
TPM1-201ENST00000267996 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
TPM1-201ENST00000267996 SYNE4Q8N205 404 aa20.09■□□□□ 0.81
TPM1-201ENST00000267996 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
TPM1-201ENST00000267996 EAF2Q96CJ1 260 aaPredicted RBP20.08■□□□□ 0.81
TPM1-201ENST00000267996 AK7Q96M32 723 aa20.08■□□□□ 0.81
TPM1-201ENST00000267996 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
TPM1-201ENST00000267996 CHMP3Q9Y3E7 222 aa20.08■□□□□ 0.81
TPM1-201ENST00000267996 EIF5BO60841 1220 aaKnown RBP20.07■□□□□ 0.8
TPM1-201ENST00000267996 SUSD4Q5VX71 490 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 SCN7AQ01118 1682 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
TPM1-201ENST00000267996 CIAO1O76071 339 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 IFIT2P09913 472 aaKnown RBP20.07■□□□□ 0.8
TPM1-201ENST00000267996 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
TPM1-201ENST00000267996 ATG9AQ7Z3C6 839 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 AACSQ86V21 672 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 FBXO3Q9UK99 471 aa20.07■□□□□ 0.8
TPM1-201ENST00000267996 TTLL11Q8NHH1 800 aa20.06■□□□□ 0.8
TPM1-201ENST00000267996 ECHDC1Q9NTX5 307 aa20.06■□□□□ 0.8
TPM1-201ENST00000267996 MYH3P11055 1940 aa20.06■□□□□ 0.8
TPM1-201ENST00000267996 C4BP0C0L5 1744 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 EYA2O00167 538 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 PDE8AO60658 829 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 GLRX3O76003 335 aaKnown RBP20.05■□□□□ 0.8
TPM1-201ENST00000267996 CTSWP56202 376 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 UTP14AQ9BVJ6 771 aaKnown RBP20.05■□□□□ 0.8
TPM1-201ENST00000267996 NARFQ9UHQ1 456 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
TPM1-201ENST00000267996 IL15P40933 162 aaPredicted RBP20.04■□□□□ 0.8
TPM1-201ENST00000267996 TFCP2Q12800 502 aa20.04■□□□□ 0.8
TPM1-201ENST00000267996 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
TPM1-201ENST00000267996 GPATCH3Q96I76 525 aa20.04■□□□□ 0.8
TPM1-201ENST00000267996 LRRC4BQ9NT99 713 aa20.04■□□□□ 0.8
TPM1-201ENST00000267996 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
TPM1-201ENST00000267996 ERC2O15083 957 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 GNPATO15228 680 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 NTSR2O95665 410 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 TNNI3KQ59H18 835 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 DDRGK1Q96HY6 314 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 C22orf23Q9BZE7 217 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 GPR108Q9NPR9 543 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 RTCBQ9Y3I0 505 aaKnown RBP20.03■□□□□ 0.8
TPM1-201ENST00000267996 FPGT-TNNI3KV9GXZ4 949 aa20.03■□□□□ 0.8
TPM1-201ENST00000267996 SLC27A3Q5K4L6 730 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms