RNA–Protein interactions for RNA: ENST00000265807.7

SH2D4A-201, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH2D4A, Length 3,352 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-201ENST00000265807 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 ITPK1Q13572 414 aa13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 TFCP2Q12800 502 aa13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 VSIG10Q8N0Z9 540 aa13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 DAXXQ9UER7 740 aaPredicted RBP13.84□□□□□ -0.19
SH2D4A-201ENST00000265807 FAM89AQ96GI7 184 aa13.83□□□□□ -0.19
SH2D4A-201ENST00000265807 GPTP24298 496 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 CWC25Q9NXE8 425 aaPredicted RBP13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 ERC2O15083 957 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 INTS5Q6P9B9 1019 aaKnown RBP13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 ATG9AQ7Z3C6 839 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 ARXQ96QS3 562 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
SH2D4A-201ENST00000265807 COL15A1P39059 1388 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 LRRC24Q50LG9 513 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 AOX1Q06278 1338 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 DDIT3P35638 169 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 COL9A3Q14050 684 aaPredicted RBP13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 ANKRD36CQ5JPF3 1778 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 MYT1Q01538 1121 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 BECN1Q14457 450 aa13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 CLASRPQ8N2M8 674 aaKnown RBP13.82□□□□□ -0.2
SH2D4A-201ENST00000265807 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.2
SH2D4A-201ENST00000265807 THRAP3Q9Y2W1 955 aaKnown RBP13.81□□□□□ -0.2
SH2D4A-201ENST00000265807 SNX21Q969T3 373 aa13.81□□□□□ -0.2
SH2D4A-201ENST00000265807 NGLY1Q96IV0 654 aa13.81□□□□□ -0.2
SH2D4A-201ENST00000265807 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
SH2D4A-201ENST00000265807 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 CHMP3Q9Y3E7 222 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 COL4A1P02462 1669 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 STARD3NLO95772 234 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 BOLA2Q9H3K6 86 aa13.8□□□□□ -0.2
SH2D4A-201ENST00000265807 SLFNL1Q499Z3 407 aa13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 IFIT2P09913 472 aaKnown RBP13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 GIGYF2Q6Y7W6 1299 aaKnown RBP13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 TNNI3KQ59H18 835 aa13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 FPGT-TNNI3KV9GXZ4 949 aa13.79□□□□□ -0.2
SH2D4A-201ENST00000265807 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 COL5A3P25940 1745 aaPredicted RBP13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 NLRP10Q86W26 655 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 FAM227BQ96M60 508 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 RREB1Q92766 1687 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 SIK1P57059 783 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 TIMM10P62072 90 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 PTH1RQ03431 593 aa13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 FNBP4Q8N3X1 1017 aaPredicted RBP13.78□□□□□ -0.2
SH2D4A-201ENST00000265807 JCADQ9P266 1359 aa13.77□□□□□ -0.2
SH2D4A-201ENST00000265807 SGSM2O43147 1006 aa13.77□□□□□ -0.2
SH2D4A-201ENST00000265807 ATP6V1AP38606 617 aa13.77□□□□□ -0.2
SH2D4A-201ENST00000265807 CRKLP46109 303 aaKnown RBP13.77□□□□□ -0.2
SH2D4A-201ENST00000265807 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.2
SH2D4A-201ENST00000265807 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 LSG1Q9H089 658 aaKnown RBP13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 MYH3P11055 1940 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 HSPA1LP34931 641 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 EIF5P55010 431 aaKnown RBP13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 VPS72Q15906 364 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 HSCBQ8IWL3 235 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
SH2D4A-201ENST00000265807 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
SH2D4A-201ENST00000265807 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
SH2D4A-201ENST00000265807 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
SH2D4A-201ENST00000265807 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 TAF6LQ9Y6J9 622 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 TAF1P21675 1872 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 REC8O95072 547 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 CASC1Q6TDU7 716 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 A0A0D9SFI3 127 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 LINC00116Q8NCU8 138 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 GREM2Q9H772 168 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
SH2D4A-201ENST00000265807 DTNBO60941 627 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 PCCAP05165 728 aaPredicted RBP13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 CNTROBQ8N137 903 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 BTAF1O14981 1849 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 FAM177BA6PVY3 158 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 CSF1RP07333 972 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 CPA1P15085 419 aa13.74□□□□□ -0.21
SH2D4A-201ENST00000265807 UPF3BQ9BZI7 483 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms