RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 ZNF157P51786 506 aaPredicted RBP11.29□□□□□ -0.6
IFT43-201ENST00000238628 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 LARGE2Q8N3Y3 721 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 PSMD1Q99460 953 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 GPRC5DQ9NZD1 345 aa11.29□□□□□ -0.6
IFT43-201ENST00000238628 FBXO46Q6PJ61 603 aaPredicted RBP11.28□□□□□ -0.6
IFT43-201ENST00000238628 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
IFT43-201ENST00000238628 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
IFT43-201ENST00000238628 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
IFT43-201ENST00000238628 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
IFT43-201ENST00000238628 STARD3NLO95772 234 aa11.27□□□□□ -0.61
IFT43-201ENST00000238628 ALDH1B1P30837 517 aa11.27□□□□□ -0.61
IFT43-201ENST00000238628 MTHFSDQ2M296 383 aaKnown RBP11.27□□□□□ -0.61
IFT43-201ENST00000238628 NBPF5PQ86XG9 351 aaPredicted RBP11.27□□□□□ -0.61
IFT43-201ENST00000238628 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
IFT43-201ENST00000238628 C2orf69Q8N8R5 385 aa11.27□□□□□ -0.61
IFT43-201ENST00000238628 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
IFT43-201ENST00000238628 TRIOBPQ9H2D6 2365 aa11.26□□□□□ -0.61
IFT43-201ENST00000238628 USP48Q86UV5 1035 aa11.26□□□□□ -0.61
IFT43-201ENST00000238628 NIM1KQ8IY84 436 aa11.26□□□□□ -0.61
IFT43-201ENST00000238628 ZNF296Q8WUU4 475 aaPredicted RBP11.26□□□□□ -0.61
IFT43-201ENST00000238628 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
IFT43-201ENST00000238628 TEX13AQ9BXU3 409 aaPredicted RBP11.25□□□□□ -0.61
IFT43-201ENST00000238628 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
IFT43-201ENST00000238628 GBA2Q9HCG7 927 aaPredicted RBP11.25□□□□□ -0.61
IFT43-201ENST00000238628 BCORQ6W2J9 1755 aa11.25□□□□□ -0.61
IFT43-201ENST00000238628 MRC1P22897 1456 aa11.25□□□□□ -0.61
IFT43-201ENST00000238628 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
IFT43-201ENST00000238628 DIAPH1O60610 1272 aaKnown RBP11.24□□□□□ -0.61
IFT43-201ENST00000238628 POTEHQ6S545 545 aa11.24□□□□□ -0.61
IFT43-201ENST00000238628 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
IFT43-201ENST00000238628 COL4A5P29400 1685 aa11.24□□□□□ -0.61
IFT43-201ENST00000238628 KLRG2A4D1S0 409 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 SLC10A3P09131 477 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 CC2D2BQ6DHV5 1058 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 ZNF496Q96IT1 587 aaPredicted RBP11.23□□□□□ -0.61
IFT43-201ENST00000238628 BCL2L13Q9BXK5 485 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 PITPNM2Q9BZ72 1349 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 CLSPNQ9HAW4 1339 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
IFT43-201ENST00000238628 CAMTA2O94983 1202 aa11.22□□□□□ -0.61
IFT43-201ENST00000238628 IL6STP40189 918 aaPredicted RBP11.22□□□□□ -0.61
IFT43-201ENST00000238628 TEFQ10587 303 aa11.22□□□□□ -0.61
IFT43-201ENST00000238628 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
IFT43-201ENST00000238628 ZNF790Q6PG37 636 aa11.22□□□□□ -0.61
IFT43-201ENST00000238628 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
IFT43-201ENST00000238628 NPC1L1Q9UHC9 1359 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 HEG1Q9ULI3 1381 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 PPIP5K2O43314 1243 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 CXCL9Q07325 125 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 TRPM4Q8TD43 1214 aa11.21□□□□□ -0.61
IFT43-201ENST00000238628 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
IFT43-201ENST00000238628 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 GPR25O00155 361 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 A1BGP04217 495 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
IFT43-201ENST00000238628 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 DZIP3Q86Y13 1208 aaKnown RBP11.2□□□□□ -0.62
IFT43-201ENST00000238628 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
IFT43-201ENST00000238628 H7C1D1 291 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 TCERG1O14776 1098 aaKnown RBP11.19□□□□□ -0.62
IFT43-201ENST00000238628 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
IFT43-201ENST00000238628 EN2P19622 333 aaPredicted RBP11.19□□□□□ -0.62
IFT43-201ENST00000238628 AOC3Q16853 763 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
IFT43-201ENST00000238628 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 CNOT7Q9UIV1 285 aaKnown RBP11.19□□□□□ -0.62
IFT43-201ENST00000238628 ZNRF3Q9ULT6 936 aa11.19□□□□□ -0.62
IFT43-201ENST00000238628 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 H0YGN5 161 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 FKTNO75072 461 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
IFT43-201ENST00000238628 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
IFT43-201ENST00000238628 TNIP1Q15025 636 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 RASAL3Q86YV0 1011 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 DCPSQ96C86 337 aaKnown RBP11.17□□□□□ -0.62
IFT43-201ENST00000238628 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
IFT43-201ENST00000238628 USP16Q9Y5T5 823 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 SIPA1L3O60292 1781 aaPredicted RBP11.17□□□□□ -0.62
IFT43-201ENST00000238628 CEP290O15078 2479 aa11.17□□□□□ -0.62
IFT43-201ENST00000238628 SHTN1A0MZ66 631 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 ADM5C9JUS6 153 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 KCNQ3O43525 872 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 RAD17O75943 681 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 CNGB1Q14028 1251 aaPredicted RBP11.16□□□□□ -0.62
IFT43-201ENST00000238628 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms