RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 EPB41L2O43491 1005 aaKnown RBP21.21■□□□□ 0.99
VRK1-201ENST00000216639 FOXO4P98177 505 aa21.21■□□□□ 0.99
VRK1-201ENST00000216639 PTPN12Q05209 780 aaKnown RBP21.21■□□□□ 0.99
VRK1-201ENST00000216639 KLHDC4Q8TBB5 520 aa21.21■□□□□ 0.99
VRK1-201ENST00000216639 ARXQ96QS3 562 aa21.21■□□□□ 0.99
VRK1-201ENST00000216639 SLKQ9H2G2 1235 aaPredicted RBP21.21■□□□□ 0.99
VRK1-201ENST00000216639 A0A0G2JS52 829 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 MYT1Q01538 1121 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 VPS72Q15906 364 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 C8orf37Q96NL8 207 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 SLC4A9Q96Q91 983 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 AK9Q5TCS8 1911 aa21.2■□□□□ 0.98
VRK1-201ENST00000216639 KAT6BQ8WYB5 2073 aa21.19■□□□□ 0.98
VRK1-201ENST00000216639 GIGYF2Q6Y7W6 1299 aaKnown RBP21.19■□□□□ 0.98
VRK1-201ENST00000216639 EAF2Q96CJ1 260 aaPredicted RBP21.19■□□□□ 0.98
VRK1-201ENST00000216639 MAP4K4O95819 1239 aaPredicted RBP21.18■□□□□ 0.98
VRK1-201ENST00000216639 IL6STP40189 918 aaPredicted RBP21.18■□□□□ 0.98
VRK1-201ENST00000216639 SPATA31A6Q5VVP1 1343 aa21.18■□□□□ 0.98
VRK1-201ENST00000216639 EVI5LQ96CN4 794 aa21.17■□□□□ 0.98
VRK1-201ENST00000216639 ACSBG1Q96GR2 724 aa21.17■□□□□ 0.98
VRK1-201ENST00000216639 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
VRK1-201ENST00000216639 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
VRK1-201ENST00000216639 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
VRK1-201ENST00000216639 PCCAP05165 728 aaPredicted RBP21.16■□□□□ 0.98
VRK1-201ENST00000216639 SMARCC1Q92922 1105 aaPredicted RBP21.16■□□□□ 0.98
VRK1-201ENST00000216639 ANTXR1Q9H6X2 564 aa21.16■□□□□ 0.98
VRK1-201ENST00000216639 BCL9LQ86UU0 1499 aa21.15■□□□□ 0.98
VRK1-201ENST00000216639 ERVV-1B6SEH8 477 aa21.15■□□□□ 0.98
VRK1-201ENST00000216639 K7ELQ4 463 aaPredicted RBP21.15■□□□□ 0.98
VRK1-201ENST00000216639 RUFY2Q8WXA3 655 aa21.15■□□□□ 0.98
VRK1-201ENST00000216639 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.15■□□□□ 0.98
VRK1-201ENST00000216639 ST18O60284 1047 aa21.15■□□□□ 0.98
VRK1-201ENST00000216639 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
VRK1-201ENST00000216639 FNBP4Q8N3X1 1017 aaPredicted RBP21.15■□□□□ 0.98
VRK1-201ENST00000216639 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
VRK1-201ENST00000216639 HIP1O00291 1037 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 ATP6V1AP38606 617 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 TFCP2Q12800 502 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 NFKBIBQ15653 356 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 TNNI3KQ59H18 835 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 DIAPH3Q9NSV4 1193 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 FPGT-TNNI3KV9GXZ4 949 aa21.14■□□□□ 0.97
VRK1-201ENST00000216639 IL15P40933 162 aaPredicted RBP21.13■□□□□ 0.97
VRK1-201ENST00000216639 ANAPC15P60006 121 aa21.13■□□□□ 0.97
VRK1-201ENST00000216639 SPRYD3Q8NCJ5 442 aa21.13■□□□□ 0.97
VRK1-201ENST00000216639 PLA2G12BQ9BX93 195 aa21.13■□□□□ 0.97
VRK1-201ENST00000216639 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 SGSM2O43147 1006 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 HSP90AA1P07900 732 aaKnown RBP21.12■□□□□ 0.97
VRK1-201ENST00000216639 SIK1P57059 783 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 DZIP3Q86Y13 1208 aaKnown RBP21.12■□□□□ 0.97
VRK1-201ENST00000216639 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 CHMP5Q9NZZ3 219 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.12■□□□□ 0.97
VRK1-201ENST00000216639 CCDC57Q2TAC2 916 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 KIAA1211Q6ZU35 1233 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 CDHR2Q9BYE9 1310 aa21.12■□□□□ 0.97
VRK1-201ENST00000216639 CIAO1O76071 339 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 HLFQ16534 295 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 NLRP10Q86W26 655 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 IL27Q8NEV9 243 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 PALLDQ8WX93 1383 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 CICQ96RK0 1608 aaPredicted RBP21.11■□□□□ 0.97
VRK1-201ENST00000216639 GPR108Q9NPR9 543 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 TLR7Q9NYK1 1049 aaKnown RBP21.11■□□□□ 0.97
VRK1-201ENST00000216639 FBXO3Q9UK99 471 aa21.11■□□□□ 0.97
VRK1-201ENST00000216639 ANKRD36CQ5JPF3 1778 aa21.1■□□□□ 0.97
VRK1-201ENST00000216639 USP21Q9UK80 565 aa21.1■□□□□ 0.97
VRK1-201ENST00000216639 EYA2O00167 538 aa21.09■□□□□ 0.97
VRK1-201ENST00000216639 ATP5JP18859 108 aa21.09■□□□□ 0.97
VRK1-201ENST00000216639 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
VRK1-201ENST00000216639 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
VRK1-201ENST00000216639 FAM89AQ96GI7 184 aa21.09■□□□□ 0.97
VRK1-201ENST00000216639 CD2BP2O95400 341 aaKnown RBP21.09■□□□□ 0.97
VRK1-201ENST00000216639 CRKLP46109 303 aaKnown RBP21.09■□□□□ 0.97
VRK1-201ENST00000216639 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
VRK1-201ENST00000216639 BOLA2Q9H3K6 86 aa21.09■□□□□ 0.97
VRK1-201ENST00000216639 GPTP24298 496 aa21.08■□□□□ 0.97
VRK1-201ENST00000216639 INTS5Q6P9B9 1019 aaKnown RBP21.08■□□□□ 0.97
VRK1-201ENST00000216639 ATG9AQ7Z3C6 839 aa21.08■□□□□ 0.97
VRK1-201ENST00000216639 DBNLQ9UJU6 430 aaKnown RBP21.08■□□□□ 0.97
VRK1-201ENST00000216639 TBC1D2BQ9UPU7 963 aa21.08■□□□□ 0.97
VRK1-201ENST00000216639 RAD50Q92878 1312 aa21.07■□□□□ 0.96
VRK1-201ENST00000216639 CIZ1Q9ULV3 898 aaPredicted RBP21.07■□□□□ 0.96
VRK1-201ENST00000216639 CSF1RP07333 972 aa21.07■□□□□ 0.96
VRK1-201ENST00000216639 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
VRK1-201ENST00000216639 TAF7LQ5H9L4 462 aa21.07■□□□□ 0.96
VRK1-201ENST00000216639 IL17RAQ96F46 866 aa21.07■□□□□ 0.96
VRK1-201ENST00000216639 RREB1Q92766 1687 aa21.06■□□□□ 0.96
VRK1-201ENST00000216639 NUP98P52948 1817 aa21.06■□□□□ 0.96
VRK1-201ENST00000216639 HSPA4P34932 840 aa21.06■□□□□ 0.96
VRK1-201ENST00000216639 MCM2P49736 904 aa21.06■□□□□ 0.96
VRK1-201ENST00000216639 MEX3CQ5U5Q3 659 aaKnown RBP21.06■□□□□ 0.96
VRK1-201ENST00000216639 FSD1Q9BTV5 496 aa21.06■□□□□ 0.96
VRK1-201ENST00000216639 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
VRK1-201ENST00000216639 ZNF34Q8IZ26 560 aa21.05■□□□□ 0.96
VRK1-201ENST00000216639 KCNQ2O43526 872 aa21.04■□□□□ 0.96
VRK1-201ENST00000216639 ITPK1Q13572 414 aa21.04■□□□□ 0.96
VRK1-201ENST00000216639 ZNF594Q96JF6 807 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms