RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SNRPD2P62316 118 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GNA13Q14344 377 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 PGGHGQ32M88 737 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 TMEM35AQ53FP2 167 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF322Q6U7Q0 402 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF620Q6ZNG0 422 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 OR51G2Q8NGK0 314 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ACOT11Q8WXI4 607 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 RFKQ969G6 155 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF707Q96C28 371 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 SAMD8Q96LT4 415 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 MCHR1Q99705 422 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 WACQ9BTA9 647 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 MED20Q9H944 212 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 MRPS30Q9NP92 439 aaKnown RBP12.92□□□□□ -0.34
PHGDH-233ENST00000642021 ENTPD4Q9Y227 616 aa12.92□□□□□ -0.34
PHGDH-233ENST00000642021 A0A0X1KG70 313 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 LANCL1O43813 399 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PCDH8O95206 1070 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PAK4O96013 591 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PRKAR1AP10644 381 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 TFPIP10646 304 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 TBXA2RP21731 343 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PRKACBP22694 351 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 HTR1FP30939 366 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 CLDN20P56880 219 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-233ENST00000642021 GPLD1P80108 840 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 OR4M2Q8NGB6 313 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 OSTF1Q92882 214 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 FCRL4Q96PJ5 515 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 TBX5Q99593 518 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 MARVELD1Q9BSK0 173 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 MOSPD1Q9UJG1 213 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 KLHL21Q9UJP4 597 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 LOC105371267A0A1B0GV96 52 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 NOTOA8MTQ0 251 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PROM1O43490 865 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 ZGLP1P0C6A0 271 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 STAT5AP42229 794 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 ANXA11P50995 505 aaKnown RBP12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PRR5P85299 388 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 AGERQ15109 404 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 CCDC58Q4VC31 144 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 FAM111BQ6SJ93 734 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 METAP1DQ6UB28 335 aaPredicted RBP12.91□□□□□ -0.34
PHGDH-233ENST00000642021 IL20RBQ6UXL0 311 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 PLEKHM3Q6ZWE6 761 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 OR2L5Q8NG80 312 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 ZFAND1Q8TCF1 268 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 SLC41A3Q96GZ6 507 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 SERGEFQ9UGK8 458 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
PHGDH-233ENST00000642021 J3QRE1 110 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 GTPBP1O00178 669 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PAHP00439 452 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 TIMP1P01033 207 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CHRNB1P11230 501 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ERP29P30040 261 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PEBP1P30086 187 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 MPIP34949 423 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 RNF144AP50876 292 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 HTRA4P83105 476 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CSTF1Q05048 431 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ACSM1Q08AH1 577 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CAMK1Q14012 370 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FGL2Q14314 439 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CCDC85BQ15834 202 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 DECR1Q16698 335 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PRAMEF8Q5VWM4 474 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PRAMEF7Q5VXH5 474 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 MZT2BQ6NZ67 158 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 C16orf62Q7Z3J2 963 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 C12orf76Q8N812 135 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 OR52E1Q8NGJ3 308 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 SPPL3Q8TCT6 385 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 UBQLN3Q9H347 655 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 TNFRSF10DQ9UBN6 386 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ACSL5Q9ULC5 683 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 CDH10Q9Y6N8 788 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 SNRNP200O75643 2136 aaKnown RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 TBC1D3BA6NDS4 549 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FAM25AB3EWG3 89 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FAM25CB3EWG5 89 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FAM25GB3EWG6 89 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 PRICKLE3O43900 615 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-233ENST00000642021 ARSBP15848 533 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 EVI2BP34910 448 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 WASP42768 502 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
PHGDH-233ENST00000642021 RIN1Q13671 783 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms