RNA–Protein interactions for RNA: ENST00000640027.1

MED17-222, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 4,569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-222	ENST00000640027	PRR18	Q8N4B5	295 aa		13.13	□□□□□ -0.31
MED17-222	ENST00000640027	SAMD8	Q96LT4	415 aa		13.13	□□□□□ -0.31
MED17-222	ENST00000640027	DYNLRB1	Q9NP97	96 aa		13.13	□□□□□ -0.31
MED17-222	ENST00000640027	CD93	Q9NPY3	652 aa		13.13	□□□□□ -0.31
MED17-222	ENST00000640027	TAF1L	Q8IZX4	1826 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027		A0A1B0GUL6	1792 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TRAV18	A0A075B6X5	111 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	SLC1A7	O00341	560 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	RAB3B	P20337	219 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	LSS	P48449	732 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ACTB	P60709	375 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PRPS1	P60891	318 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ACTG1	P63261	375 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	GLO1	Q04760	184 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TCEAL1	Q15170	157 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	CPO	Q8IVL8	374 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TANK	Q92844	425 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TCEAL4	Q96EI5	215 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	STARD5	Q9NSY2	213 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	SLC39A1	Q9NY26	324 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	GPR160	Q9UJ42	338 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	CCDC88A	Q3V6T2	1871 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	C12orf71	A8MTZ7	269 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	FRS3	O43559	492 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	KIAA0513	O60268	411 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	CREBL2	O60519	120 aa	Predicted RBP	13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OPN1LW	P04000	364 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	AMY2A	P04746	511 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	RGS6	P49758	472 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	GTDC1	Q4AE62	458 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TMEM236	Q5W0B7	351 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	LANCL3	Q6ZV70	420 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OR9A2	Q8NGT5	310 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	MYRFL	Q96LU7	910 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	DPH1	Q9BZG8	443 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OR51B6	Q9H340	312 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ST14	Q9Y5Y6	855 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	AKAP6	Q13023	2319 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	RP2	O75695	350 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PNMT	P11086	282 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TNFSF4	P23510	183 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	CD40LG	P29965	261 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ETV4	P43268	484 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ZXDB	P98169	803 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PIANP	Q8IYJ0	282 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OR5H2	Q8NGV7	314 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	HLA-C	Q95604	372 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	NEIL2	Q969S2	332 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	RHBDF1	Q96CC6	855 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	MACROD1	Q9BQ69	325 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PAPOLG	Q9BWT3	736 aa	Known RBP	13.12	□□□□□ -0.31
MED17-222	ENST00000640027	C14orf119	Q9NWQ9	140 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	CPNE7	Q9UBL6	633 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	HMX3	A6NHT5	357 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	RAD1	O60671	282 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PPP1R3D	O95685	299 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OR8U9	P0C7N5	309 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	C1orf220	Q5T0J3	134 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	PARS2	Q7L3T8	475 aa	Known RBP	13.12	□□□□□ -0.31
MED17-222	ENST00000640027	HSD11B1L	Q7Z5J1	315 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ZNF610	Q8N9Z0	462 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	OR52E1	Q8NGJ3	308 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.12	□□□□□ -0.31
MED17-222	ENST00000640027	SLC2A12	Q8TD20	617 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	FKBP10	Q96AY3	582 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	ZMYND19	Q96E35	227 aa	Predicted RBP	13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TXNDC15	Q96J42	360 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	TAS2R8	Q9NYW2	309 aa		13.12	□□□□□ -0.31
MED17-222	ENST00000640027	SPAG17	Q6Q759	2223 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027		A0A0A6YYH2	397 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027		A6NJ64	397 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027		A8MV72	311 aa	Predicted RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	LDB3	O75112	727 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	CER1	O95813	267 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	NPR2	P20594	1047 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	ADH6	P28332	368 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	ETV5	P41161	510 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	CSNK2A1	P68400	391 aa	Predicted RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	CDK3	Q00526	305 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	NTRK2	Q16620	822 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	NADSYN1	Q6IA69	706 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	OPN5	Q6U736	354 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	ASRGL1	Q7L266	308 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	PDZD3	Q86UT5	571 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	TMEM173	Q86WV6	379 aa	Predicted RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	MARVELD2	Q8N4S9	558 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	ANKLE1	Q8NAG6	615 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	CSNK2A3	Q8NEV1	391 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	PHOSPHO2	Q8TCD6	241 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	MEPE	Q9NQ76	525 aa	Predicted RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	TMEM100	Q9NV29	134 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	MRPL15	Q9P015	296 aa	Known RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	USP36	Q9P275	1121 aa	Known RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	KLHL21	Q9UJP4	597 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	AHCTF1	Q8WYP5	2266 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.11	□□□□□ -0.31
MED17-222	ENST00000640027	HHLA1	C9JL84	531 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	ZFAND5	O76080	213 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	HPR	P00739	348 aa		13.11	□□□□□ -0.31
MED17-222	ENST00000640027	SERPINA5	P05154	406 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms