RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	AMDHD1	Q96NU7	426 aa		13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599	LMF2	Q9BU23	707 aa	Known RBP	13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599	RNF122	Q9H9V4	155 aa		13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599	MID2	Q9UJV3	735 aa		13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599	ABCA4	P78363	2273 aa		13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599	TACC2	O95359	2948 aa		13.23	□□□□□ -0.29
TARDBP-231	ENST00000639599		A0A087WZY1	265 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599		H0YC42	278 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	KIF2A	O00139	706 aa	Predicted RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	SLC28A1	O00337	649 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	SMAD7	O15105	426 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	HEXA	P06865	529 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	UROS	P10746	265 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	PPP3CB	P16298	524 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	ZNF17	P17021	662 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	TBXA2R	P21731	343 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	SUCLG1	P53597	346 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	FOXA1	P55317	472 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	TPD52	P55327	224 aa	Predicted RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	CLDN20	P56880	219 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	FRMD7	Q6ZUT3	714 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	YTHDF3	Q7Z739	585 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	METTL25	Q8N6Q8	603 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	ZNF610	Q8N9Z0	462 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	JADE3	Q92613	823 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	REXO5	Q96IC2	774 aa	Known RBP	13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599		Q96MF0	132 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	SMR3A	Q99954	134 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	LRTM1	Q9HBL6	345 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	TAS2R7	Q9NYW3	318 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	FLRT3	Q9NZU0	649 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	SH3BP4	Q9P0V3	963 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599	FIS1	Q9Y3D6	152 aa		13.22	□□□□□ -0.29
TARDBP-231	ENST00000639599		A0A1W2PPR1	153 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	DEFB108A	A8MXU0	73 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599		H7C1Q1	480 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	SCD	O00767	359 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	NEFH	P12036	1026 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	GCA	P28676	217 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	MANF	P55145	182 aa	Known RBP	13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	PRR5	P85299	388 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	PPP2R2B	Q00005	443 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	OCRL	Q01968	901 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	SLC29A2	Q14542	456 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	BEX5	Q5H9J7	111 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	ANKRD34A	Q69YU3	496 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	GTF2IRD2B	Q6EKJ0	949 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	TRIM46	Q7Z4K8	759 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	GTF2IRD2	Q86UP8	949 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	CXorf67	Q86X51	503 aa	Predicted RBP	13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	CDRT4	Q8N9R6	151 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	OR6K3	Q8NGY3	331 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	FBXO30	Q8TB52	745 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	TMEM171	Q8WVE6	324 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	PIK3R3	Q92569	461 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	ZBTB8A	Q96BR9	441 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	MS4A4E	Q96PG1	132 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	C1orf109	Q9NX04	203 aa		13.21	□□□□□ -0.29
TARDBP-231	ENST00000639599	GXYLT2	A0PJZ3	443 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	UBFD1	O14562	309 aa	Known RBP	13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	AKAP10	O43572	662 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	IFI6	P09912	130 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	ALOX5	P09917	674 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	NR1H2	P55055	460 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	GRAMD1B	Q3KR37	738 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	ALKBH2	Q6NS38	261 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	PRSS57	Q6UWY2	283 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	PLEKHM3	Q6ZWE6	761 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	ZNF551	Q7Z340	670 aa	Predicted RBP	13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	MISP	Q8IVT2	679 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	HOMEZ	Q8IX15	550 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	COX18	Q8N8Q8	333 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	GATS	Q8NAP1	163 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	NUP43	Q8NFH3	380 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	KIF18A	Q8NI77	898 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	C11orf24	Q96F05	449 aa	Predicted RBP	13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	METTL2A	Q96IZ6	378 aa	Known RBP	13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	TACO1	Q9BSH4	297 aa	Known RBP	13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	CXorf56	Q9H5V9	222 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	GLRX2	Q9NS18	164 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	CLEC4A	Q9UMR7	237 aa		13.2	□□□□□ -0.3
TARDBP-231	ENST00000639599	SMIM23	A6NLE4	172 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	SHISA8	B8ZZ34	492 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	COPE	O14579	308 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	PSMG1	O95456	288 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	NUDT14	O95848	222 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	PABPC4L	P0CB38	370 aa	Known RBP	13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	CPA3	P15088	417 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	ATP6V1C1	P21283	382 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	CCKAR	P32238	428 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	SERPINB4	P48594	390 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	PRIM2	P49643	509 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	RPL38	P63173	70 aa	Known RBP	13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	HBM	Q6B0K9	141 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	CLEC6A	Q6EIG7	209 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	ANKRD26P1	Q6NSI1	321 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	FIGNL1	Q6PIW4	674 aa		13.19	□□□□□ -0.3
TARDBP-231	ENST00000639599	BEND4	Q6ZU67	534 aa		13.19	□□□□□ -0.3

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