RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SLC35A5Q9BS91 424 aa19.83■□□□□ 0.76
SCN1B-206ENST00000638536 MED4Q9NPJ6 270 aa19.83■□□□□ 0.76
SCN1B-206ENST00000638536 MEMO1Q9Y316 297 aa19.83■□□□□ 0.76
SCN1B-206ENST00000638536 ARHGAP21Q5T5U3 1957 aa19.83■□□□□ 0.76
SCN1B-206ENST00000638536 CRYBG3Q68DQ2 2970 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 CCDC154A6NI56 674 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 ATP8B1O43520 1251 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 CBR3O75828 277 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 OXSR1O95747 527 aaPredicted RBP19.82■□□□□ 0.76
SCN1B-206ENST00000638536 RNF144AP50876 292 aaPredicted RBP19.82■□□□□ 0.76
SCN1B-206ENST00000638536 ADORA2A-AS1P86434 159 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 TIGD2Q4W5G0 525 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 DCST2Q5T1A1 773 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 CGB2Q6NT52 195 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 OR51I1Q9H343 314 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 MED11Q9P086 117 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 ABCG2Q9UNQ0 655 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 ADGRG4Q8IZF6 3080 aa19.82■□□□□ 0.76
SCN1B-206ENST00000638536 IL6P05231 212 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 TCEA1P23193 301 aaKnown RBP19.81■□□□□ 0.76
SCN1B-206ENST00000638536 DCST1Q5T197 706 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 TNFAIP8L2Q6P589 184 aaPredicted RBP19.81■□□□□ 0.76
SCN1B-206ENST00000638536 DNAJC14Q6Y2X3 702 aaPredicted RBP19.81■□□□□ 0.76
SCN1B-206ENST00000638536 ZNF621Q6ZSS3 439 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 MARVELD2Q8N4S9 558 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 GATSQ8NAP1 163 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 RAB8BQ92930 207 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 NEURL3Q96EH8 262 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 KLHDC3Q9BQ90 382 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 DSN1Q9H410 356 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 CENPEQ02224 2701 aa19.81■□□□□ 0.76
SCN1B-206ENST00000638536 A1L4Q6 167 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 GMFGO60234 142 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ANGPTL1O95841 491 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 OR12D1P0DN82 309 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 MRPL19P49406 292 aaKnown RBP19.8■□□□□ 0.76
SCN1B-206ENST00000638536 CASP6P55212 293 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 GTDC1Q4AE62 458 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 BHLHB9Q6PI77 547 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ARFGAP2Q8N6H7 521 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 FADS6Q8N9I5 356 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 OR2M3Q8NG83 312 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 DMRTA2Q96SC8 542 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 SDF2Q99470 211 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 FGFR1OP2Q9NVK5 253 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 PPP4R1LQ9P1A2 415 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ACAD8Q9UKU7 415 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 A0A0G2JND7 137 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 FAM234BA2RU67 622 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 PRAMEF27A3QJZ7 478 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 OR14I1A6ND48 311 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ALG1L2C9J202 215 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ZIC3O60481 467 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 CLDN1O95832 211 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 TBXA2RP21731 343 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 CRYZQ08257 329 aaKnown RBP19.8■□□□□ 0.76
SCN1B-206ENST00000638536 CDSNQ15517 529 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 ZNF585AQ6P3V2 769 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 RNF130Q86XS8 419 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 PNPT1Q8TCS8 783 aaKnown RBP19.8■□□□□ 0.76
SCN1B-206ENST00000638536 MIPOL1Q8TD10 442 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 TBL1XR1Q9BZK7 514 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 SLC52A3Q9NQ40 469 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 CCDC167Q9P0B6 97 aa19.8■□□□□ 0.76
SCN1B-206ENST00000638536 C15orf38-AP3S2A0A0A6YYH1 394 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 FCMRO60667 390 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 KRT16P08779 473 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 ESRRAP11474 423 aaPredicted RBP19.79■□□□□ 0.76
SCN1B-206ENST00000638536 BMP7P18075 431 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 CHI3L1P36222 383 aaPredicted RBP19.79■□□□□ 0.76
SCN1B-206ENST00000638536 FUT5Q11128 374 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 CD226Q15762 336 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 COX20Q5RI15 118 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.79■□□□□ 0.76
SCN1B-206ENST00000638536 RTL6Q6ICC9 239 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 SLC2A7Q6PXP3 512 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 ITLN2Q8WWU7 325 aaPredicted RBP19.79■□□□□ 0.76
SCN1B-206ENST00000638536 TIMP4Q99727 224 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 G6PC3Q9BUM1 346 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 OR2B2Q9GZK3 357 aa19.79■□□□□ 0.76
SCN1B-206ENST00000638536 CENPVL1A0A0U1RR11 272 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 KDM4EB2RXH2 506 aaPredicted RBP19.78■□□□□ 0.76
SCN1B-206ENST00000638536 RFXANKO14593 260 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 STX1BP61266 288 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 HIST2H2BCQ6DN03 193 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 VASNQ6EMK4 673 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 BLOC1S3Q6QNY0 202 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 XAGE5Q8WWM1 108 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 GTF2H4Q92759 462 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 SARAFQ96BY9 339 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 AURKBQ96GD4 344 aaPredicted RBP19.78■□□□□ 0.76
SCN1B-206ENST00000638536 UGT2B28Q9BY64 529 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 ZNF385DQ9H6B1 395 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 UBQLN4Q9NRR5 601 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 ALKBH4Q9NXW9 302 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 TAS2R10Q9NYW0 307 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 KCNE5Q9UJ90 142 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 RPH3AQ9Y2J0 694 aaPredicted RBP19.78■□□□□ 0.76
SCN1B-206ENST00000638536 FAM215AQ9Y5M1 114 aa19.78■□□□□ 0.76
SCN1B-206ENST00000638536 E9PLN8 166 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms