RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 FESP07332 822 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 TUBBP07437 444 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 ZNF17P17021 662 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 AGTR1P30556 359 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 MAGEA4P43358 317 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 KRTAP24-1Q3LI83 254 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 GTF2IRD2BQ6EKJ0 949 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 MFSD12Q6NUT3 480 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 DNAJC14Q6Y2X3 702 aaPredicted RBP17.95■□□□□ 0.46
TARDBP-228ENST00000629725 RPS27LQ71UM5 84 aaKnown RBP17.95■□□□□ 0.46
TARDBP-228ENST00000629725 GALNT10Q86SR1 603 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 GTF2IRD2Q86UP8 949 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 PLD6Q8N2A8 252 aaKnown RBP17.95■□□□□ 0.46
TARDBP-228ENST00000629725 ADGRG7Q96K78 797 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 GRPEL1Q9HAV7 217 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 GRHL1Q9NZI5 618 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 XPR1Q9UBH6 696 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 MRTO4Q9UKD2 239 aaKnown RBP17.95■□□□□ 0.46
TARDBP-228ENST00000629725 CADP27708 2225 aa17.95■□□□□ 0.46
TARDBP-228ENST00000629725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.94■□□□□ 0.465e-9■■■■■ 33.2
TARDBP-228ENST00000629725 IGLV3-32A0A0A0MS00 114 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 GNG14A0A1W2PPG7 69 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 PPP6CO00743 305 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 CXCL13O43927 109 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 SSX4O60224 188 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 PCDH7O60245 1069 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 SMIM24O75264 130 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 IL33O95760 270 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 ANGPTL1O95841 491 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 RBP1P09455 135 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 ADH6P28332 368 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 RFX3P48380 749 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 SERPINB8P50452 374 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 PSMD4P55036 377 aaKnown RBP17.94■□□□□ 0.46
TARDBP-228ENST00000629725 GNG11P61952 73 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 TSC22D1Q15714 1073 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 TAB1Q15750 504 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 FIGNL1Q6PIW4 674 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 EXOC3L1Q86VI1 746 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 KBTBD8Q8NFY9 601 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 HSD17B8Q92506 261 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 TRAF4Q9BUZ4 470 aaPredicted RBP17.94■□□□□ 0.46
TARDBP-228ENST00000629725 BEX2Q9BXY8 128 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 AMBRA1Q9C0C7 1298 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 Q9N2J8 555 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 FBXO34Q9NWN3 711 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 FREM1Q5H8C1 2179 aa17.94■□□□□ 0.46
TARDBP-228ENST00000629725 FAM187AA6NFU0 413 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 TNFSF11O14788 317 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 ADAMDEC1O15204 470 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 GCM2O75603 506 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-228ENST00000629725 OPN1LWP04000 364 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 TSPAN8P19075 237 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 IL32P24001 234 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 PRR5P85299 388 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 BSPH1Q075Z2 132 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 UAP1Q16222 522 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-228ENST00000629725 SFRP5Q5T4F7 317 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 FAM219BQ5XKK7 198 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 ESPNLQ6ZVH7 1005 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 ATG4DQ86TL0 474 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-228ENST00000629725 GABRG1Q8N1C3 465 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 ZNF619Q8N2I2 560 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 BBS4Q96RK4 519 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 KCNK17Q96T54 332 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 TRIM2Q9C040 744 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 FAIMQ9NVQ4 179 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 ALPK2Q86TB3 2170 aa17.93■□□□□ 0.46
TARDBP-228ENST00000629725 IGHV4-30-2A0A087WSY4 118 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 A0A087WV62 115 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 UTS2O95399 124 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 CD8AP01732 235 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 RPS17P08708 135 aaKnown RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 HSD3B1P14060 373 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 HSD3B2P26439 372 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 PLTPP55058 493 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 CDH13P55290 713 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 RAC1P63000 192 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 RAE1P78406 368 aaKnown RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 ZNHIT3Q15649 155 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 NRF1Q16656 503 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 TMEM249Q2WGJ8 235 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 APOOLQ6UXV4 268 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 GTPBP8Q8N3Z3 284 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 CEP112Q8N8E3 955 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 OR2V1Q8NHB1 315 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 SLC9A6Q92581 669 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 TNFRSF13CQ96RJ3 184 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 NAPGQ99747 312 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 GRIP2Q9C0E4 1043 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 TMEM160Q9NX00 188 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 CISD1Q9NZ45 108 aaKnown RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 DMGDHQ9UI17 866 aaKnown RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 ZNF225Q9UK10 706 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 NFU1Q9UMS0 254 aa17.92■□□□□ 0.46
TARDBP-228ENST00000629725 C19orf53Q9UNZ5 99 aaPredicted RBP17.92■□□□□ 0.46
TARDBP-228ENST00000629725 A0A087WZY1 265 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 FAM234BA2RU67 622 aa17.91■□□□□ 0.46
TARDBP-228ENST00000629725 JUNP05412 331 aaKnown RBP17.91■□□□□ 0.46
TARDBP-228ENST00000629725 NCBP2P52298 156 aaKnown RBP eCLIP17.91■□□□□ 0.461e-12■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms