RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 MCEMP1Q8IX19 187 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 OR4Q3Q8NH05 313 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 RNF208Q9H0X6 261 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 GAREM1Q9H706 876 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 DNMT3AQ9Y6K1 912 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3DA0A087WVF3 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3IA0A087WXS9 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3EA0A087X179 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3KA0A087X1G2 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3FA6NER0 549 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3LB9A6J9 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 FADS1O60427 444 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 AHSA1O95433 338 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3HP0C7X1 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ISL1P61371 349 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC35A2P78381 396 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 DUSP7Q16829 419 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 HENMT1Q5T8I9 393 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3GQ6DHY5 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3CQ6IPX1 549 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 NXPE4Q6UWF7 544 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 FAM83HQ6ZRV2 1179 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 TBC1D3Q8IZP1 549 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 ARFGAP1Q8N6T3 406 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ARL14EPQ8N8R7 260 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 BOLLQ8N9W6 283 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 CCDC71LQ8N9Z2 235 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 OVCA2Q8WZ82 227 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SAMD8Q96LT4 415 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ZNF583Q96ND8 569 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 EVA1AQ9H8M9 152 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CLEC4EQ9ULY5 219 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 D6RAR5 112 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 MTX2O75431 263 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 EGFP01133 1207 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 PRKCAP17252 672 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SDC1P18827 310 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC6A9P48067 706 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 NRG3P56975 720 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 IL13RA1P78552 427 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 KDM4DQ6B0I6 523 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 KIAA1324Q6UXG2 1013 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 NPWQ8N729 165 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 OR2T4Q8NH00 348 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 RBP7Q96R05 134 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SPIN2AQ99865 258 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SPIN2BQ9BPZ2 258 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC25A32Q9H2D1 315 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 DUS2Q9NX74 493 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 TRDV1A0A1B0GX56 115 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 A0A1W2PS29 197 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TMEM150CB9EJG8 249 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 C8orf89P0DMQ9 161 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TAS2R38P59533 333 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CRYZQ08257 329 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 PPA1Q15181 289 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 DHCR24Q15392 516 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC6A19Q695T7 634 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC22A25Q6T423 547 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 HIST2H3AQ71DI3 136 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TMUB2Q71RG4 321 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CD200R1Q8TD46 325 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ZNF578Q96N58 590 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 C12orf57Q99622 126 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CMKLR1Q99788 373 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 NDRG3Q9UGV2 375 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 MAFFQ9ULX9 164 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 C2orf78A6NCI8 922 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TO15178 435 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 MED6O75586 246 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 GIPP09681 153 aaPredicted RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 SSTP61278 116 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SP2Q02086 613 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 BATFQ16520 125 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ARSIQ5FYB1 569 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 TPGS2Q68CL5 300 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 MEPCEQ7L2J0 689 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 NRMQ8IXM6 262 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 SLC25A46Q96AG3 418 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 ZMAT5Q9UDW3 170 aaKnown RBP8.43□□□□□ -1.06
VCL-206ENST00000623461 CAMK2AQ9UQM7 478 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 CORINQ9Y5Q5 1042 aa8.43□□□□□ -1.06
VCL-206ENST00000623461 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
VCL-206ENST00000623461 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 CA12O43570 354 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 PIPP12273 146 aaPredicted RBP8.42□□□□□ -1.06
VCL-206ENST00000623461 APEX1P27695 318 aaKnown RBP8.42□□□□□ -1.06
VCL-206ENST00000623461 CCKBRP32239 447 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 GZMKP49863 264 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 RNF212Q495C1 297 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 TMEM164Q5U3C3 297 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 ARHGAP12Q8IWW6 846 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 CPA6Q8N4T0 437 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 SFXN5Q8TD22 340 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 GPR148Q8TDV2 347 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 YIPF6Q96EC8 236 aa8.42□□□□□ -1.06
VCL-206ENST00000623461 LIN37Q96GY3 246 aaPredicted RBP8.42□□□□□ -1.06
VCL-206ENST00000623461 FYTTD1Q96QD9 318 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms