RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 ZNF558Q96NG5 402 aa11□□□□□ -0.65
CLTC-215ENST00000621829 NCDNQ9UBB6 729 aa11□□□□□ -0.65
CLTC-215ENST00000621829 IGFBP1P08833 259 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 HEPHL1Q6MZM0 1159 aa11□□□□□ -0.65
CLTC-215ENST00000621829 FBXW12Q6X9E4 464 aa11□□□□□ -0.65
CLTC-215ENST00000621829 Q6ZNX1 250 aa11□□□□□ -0.65
CLTC-215ENST00000621829 VASH1Q7L8A9 365 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 LYSMD2Q8IV50 215 aa11□□□□□ -0.65
CLTC-215ENST00000621829 CPA6Q8N4T0 437 aa11□□□□□ -0.65
CLTC-215ENST00000621829 OR56B4Q8NH76 319 aa11□□□□□ -0.65
CLTC-215ENST00000621829 BBS10Q8TAM1 723 aa11□□□□□ -0.65
CLTC-215ENST00000621829 OR1E3Q8WZA6 343 aa11□□□□□ -0.65
CLTC-215ENST00000621829 FYTTD1Q96QD9 318 aaKnown RBP11□□□□□ -0.65
CLTC-215ENST00000621829 AGPAT4Q9NRZ5 378 aa11□□□□□ -0.65
CLTC-215ENST00000621829 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 B3GNT2Q9NY97 397 aa11□□□□□ -0.65
CLTC-215ENST00000621829 SMIM28A0A1B0GU29 152 aa11□□□□□ -0.65
CLTC-215ENST00000621829 GPR25O00155 361 aa11□□□□□ -0.65
CLTC-215ENST00000621829 ACP5P13686 325 aa11□□□□□ -0.65
CLTC-215ENST00000621829 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 NPBWR1P48145 328 aa11□□□□□ -0.65
CLTC-215ENST00000621829 CRYBB1P53674 252 aaPredicted RBP11□□□□□ -0.65
CLTC-215ENST00000621829 FXNQ16595 210 aa11□□□□□ -0.65
CLTC-215ENST00000621829 TRAM1L1Q8N609 369 aa11□□□□□ -0.65
CLTC-215ENST00000621829 SIGLEC10Q96LC7 697 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RANBP9Q96S59 729 aa11□□□□□ -0.65
CLTC-215ENST00000621829 NAALAD2Q9Y3Q0 740 aa11□□□□□ -0.65
CLTC-215ENST00000621829 PRNPP04156 253 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RPS12P25398 132 aaKnown RBP11□□□□□ -0.65
CLTC-215ENST00000621829 CCR6P51684 374 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RAP1AP62834 184 aa11□□□□□ -0.65
CLTC-215ENST00000621829 SLC18B1Q6NT16 456 aa11□□□□□ -0.65
CLTC-215ENST00000621829 DPPA4Q7L190 304 aa11□□□□□ -0.65
CLTC-215ENST00000621829 SULF2Q8IWU5 870 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RNF128Q8TEB7 428 aa11□□□□□ -0.65
CLTC-215ENST00000621829 ZNF516Q92618 1163 aa11□□□□□ -0.65
CLTC-215ENST00000621829 ASB6Q9NWX5 421 aa11□□□□□ -0.65
CLTC-215ENST00000621829 LOXHD1Q8IVV2 1947 aa11□□□□□ -0.65
CLTC-215ENST00000621829 GM2AP17900 193 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RAB35Q15286 201 aa11□□□□□ -0.65
CLTC-215ENST00000621829 RIC1Q4ADV7 1423 aa11□□□□□ -0.65
CLTC-215ENST00000621829 GDPGP1Q6ZNW5 385 aa11□□□□□ -0.65
CLTC-215ENST00000621829 OR4K17Q8NGC6 315 aa11□□□□□ -0.65
CLTC-215ENST00000621829 DENND1AQ8TEH3 1009 aa11□□□□□ -0.65
CLTC-215ENST00000621829 YIPF5Q969M3 257 aa11□□□□□ -0.65
CLTC-215ENST00000621829 C4orf36Q96KX1 117 aa11□□□□□ -0.65
CLTC-215ENST00000621829 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
CLTC-215ENST00000621829 FBXO8Q9NRD0 319 aa11□□□□□ -0.65
CLTC-215ENST00000621829 NPIPA2E9PIF3 369 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 NPIPA3F8WFD2 350 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 MAOBP27338 520 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 EMP3P54852 163 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 CARD18P57730 90 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 TESK1Q15569 626 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 METAP1DQ6UB28 335 aaPredicted RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 CLECL1Q8IZS7 167 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 DTWD1Q8N5C7 304 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 DOK4Q8TEW6 326 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 SETD7Q8WTS6 366 aaKnown RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMPRSS11EQ9UL52 423 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 NDRG2Q9UN36 371 aaKnown RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 FER1L6Q2WGJ9 1857 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 MST1RQ04912 1400 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 GAPDHSO14556 408 aaPredicted RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 FKTNO75072 461 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 CLCNKAP51800 687 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 OGDHQ02218 1023 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.99□□□□□ -0.65
CLTC-215ENST00000621829 C11orf54Q9H0W9 315 aaPredicted RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMEM231Q9H6L2 316 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 ARNT2Q9HBZ2 717 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 EVA1BQ9NVM1 165 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 IQGAP1P46940 1657 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 KIAA1210Q9ULL0 1709 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 MPIG6BO95866 241 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 ADORA3P0DMS8 318 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 DCTP40126 519 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 PCBP1Q15365 356 aaKnown RBP eCLIP10.99□□□□□ -0.654e-11■■■□□ 19.1
CLTC-215ENST00000621829 ADGRF1Q5T601 910 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 OR52P1PQ8NH57 321 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 SLC2A12Q8TD20 617 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 FAM173AQ9BQD7 235 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 SLC25A31Q9H0C2 315 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 EXO1Q9UQ84 846 aaKnown RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMEM14AQ9Y6G1 99 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMEM225BP0DP42 221 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 HNF1AP20823 631 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 SPOCK1Q08629 439 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 LRIF1Q5T3J3 769 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 RELL1Q8IUW5 271 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 ZMYND19Q96E35 227 aaPredicted RBP10.99□□□□□ -0.65
CLTC-215ENST00000621829 DHRS9Q9BPW9 319 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 EMC7Q9NPA0 242 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 TMEM98Q9Y2Y6 226 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 SURF4O15260 269 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 GRIN3BO60391 1043 aa10.99□□□□□ -0.65
CLTC-215ENST00000621829 KLF8O95600 359 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms