RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SLC34A3Q8N130 599 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF615Q8N8J6 731 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 Q8NA96 180 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FNDC5Q8NAU1 212 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 MINDY2Q8NBR6 621 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF555Q8NEP9 628 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 OR7G2Q8NG99 324 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 OR4K14Q8NGD5 310 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 OR1N1Q8NGS0 311 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 OR9A2Q8NGT5 310 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NUBPLQ8TB37 319 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SLC2A12Q8TD20 617 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RAB2BQ8WUD1 216 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 HDAC2Q92769 488 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 KAT2AQ92830 837 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 BORCS5Q969J3 196 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SLCO4A1Q96BD0 722 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 CTHRC1Q96CG8 243 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NMD3Q96D46 503 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SENP5Q96HI0 755 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FBXL20Q96IG2 436 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 AMDHD1Q96NU7 426 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SECISBP2Q96T21 854 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RBM4BQ9BQ04 359 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RBM4Q9BWF3 364 aaKnown RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SPATA9Q9BWV2 254 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DEFB126Q9BYW3 111 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 OR8D2Q9GZM6 311 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 GLIPR2Q9H4G4 154 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 REEP4Q9H6H4 257 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 RMND5AQ9H871 391 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NANOGQ9H9S0 305 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SLC52A3Q9NQ40 469 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 SLC35C2Q9NQQ7 365 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 TBC1D23Q9NUY8 699 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PLA2G3Q9NZ20 509 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 USE1Q9NZ43 259 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DNAJB9Q9UBS3 223 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 COPS7AQ9UBW8 275 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ATP6V1HQ9UI12 483 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 UTS2RQ9UKP6 389 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 FAF1Q9UNN5 650 aaPredicted RBP4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ERVK-19Q9WJR5 959 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PCDHGB3Q9Y5G1 929 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 PCDHGB1Q9Y5G3 927 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ORC6Q9Y5N6 252 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 EML6Q6ZMW3 1958 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 NINQ8N4C6 2090 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 DNAJC13O75165 2243 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ZNF407Q9C0G0 2248 aa4.85□□□□□ -1.63
SHMT1-211ENST00000618902 ASPDHA6ND91 283 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 WIPF3A6NGB9 483 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 TTC36A6NLP5 189 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 H3BSA7 217 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 M0QX08 132 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 NME4O00746 187 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 ARPC2O15144 300 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 ACOX3O15254 700 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 OR10H2O60403 315 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 PFDN1O60925 122 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 UGT2B11O75310 529 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 WISP2O76076 250 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 WDPCPO95876 746 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 HOXD4P09016 255 aaPredicted RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 CCDC159P0C7I6 412 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 ATP6V1B1P15313 513 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 PORP16435 677 aaPredicted RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 NAGAP17050 411 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 CSNK2A2P19784 350 aaPredicted RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 TCN1P20061 433 aaPredicted RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 NT5EP21589 574 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 TMED10P49755 219 aaKnown RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 DGKQP52824 942 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 CASP6P55212 293 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 CLDN8P56748 225 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 SLC37A1P57057 533 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 MLF1P58340 268 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 C21orf58P58505 322 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 DCAF7P61962 342 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 RPP38P78345 283 aaKnown RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 ADARB1P78563 741 aaKnown RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 HPCAP84074 193 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 PLIN5Q00G26 463 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 LIPEQ05469 1076 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 SRSF11Q05519 484 aaKnown RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 MAP4K2Q12851 820 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 HEPACAMQ14CZ8 416 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 NRF1Q16656 503 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 VPS26BQ4G0F5 336 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 TRMT12Q53H54 448 aaKnown RBP4.84□□□□□ -1.63
SHMT1-211ENST00000618902 DESI1Q6ICB0 168 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 ERICH5Q6P6B1 374 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 OPN5Q6U736 354 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 LYPD8Q6UX82 237 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 NPSR1Q6W5P4 371 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 RPTNQ6XPR3 784 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 TMEM64Q6YI46 380 aa4.84□□□□□ -1.63
SHMT1-211ENST00000618902 HSDL2Q6YN16 418 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms