RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CDKN2CP42773 168 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 MASP1P48740 699 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DSCR4P56555 118 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 NME5P56597 212 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 POU6F2P78424 691 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 TXNL4AP83876 142 aaKnown RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 C17orf67Q0P5P2 114 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 TP53BP2Q13625 1128 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 GANABQ14697 944 aaKnown RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 ARHGAP11BQ3KRB8 267 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 GLYR1Q49A26 553 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 EIPR1Q53HC9 387 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CGB2Q6NT52 195 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 BLOC1S3Q6QNY0 202 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ACAD11Q709F0 780 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ADGRE4PQ86SQ3 457 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CD163Q86VB7 1156 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 FJX1Q86VR8 437 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ANKRD46Q86W74 232 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CLEC4FQ8N1N0 589 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 MIER2Q8N344 545 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ZNF808Q8N4W9 903 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 ARFGAP2Q8N6H7 521 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 COX18Q8N8Q8 333 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ACBD4Q8NC06 268 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 FAM83FQ8NEG4 500 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 OR4A15Q8NGL6 344 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 OR9I1Q8NGQ6 314 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 OR5AK3PQ8NH89 298 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ADAMTS15Q8TE58 950 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ZFP90Q8TF47 636 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 DYDC1Q8WWB3 177 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 GTF2H4Q92759 462 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 CDS1Q92903 461 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SARAFQ96BY9 339 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 JSRP1Q96MG2 331 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 UCN2Q96RP3 112 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SDF2Q99470 211 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 YIPF4Q9BSR8 244 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 INPP5KQ9BT40 448 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 NMUR2Q9GZQ4 415 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 ZNF350Q9GZX5 532 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 HOXD1Q9GZZ0 328 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SAP130Q9H0E3 1048 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SLC6A15Q9H2J7 730 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 HHATLQ9HCP6 504 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SDHAF3Q9NRP4 125 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 UBQLN4Q9NRR5 601 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 SLC6A13Q9NSD5 602 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 FAF1Q9UNN5 650 aaPredicted RBP7.5□□□□□ -1.21
NEK3-209ENST00000618856 FAM215AQ9Y5M1 114 aa7.5□□□□□ -1.21
NEK3-209ENST00000618856 NUP214P35658 2090 aaPredicted RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 C7orf72A4D263 438 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 AHRRA9YTQ3 701 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 C9JVG2 144 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 NPIPA2E9PIF3 369 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 NPIPA3F8WFD2 350 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 POLR3GO15318 223 aaPredicted RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 CFLARO15519 480 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ANGPTL1O95841 491 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 AGR2O95994 175 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 TPOP07202 933 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 GABRA1P14867 456 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 BMP7P18075 431 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 MATN1P21941 496 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 CHMP24386 653 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 PSMA4P25789 261 aaKnown RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 ACVR2AP27037 513 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 MSX1P28360 303 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ADH7P40394 386 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 TRPC1P48995 793 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 CLK3P49761 638 aaKnown RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 POLR2JP52435 117 aaKnown RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 ATP12AP54707 1039 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 CASP6P55212 293 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 FUT5Q11128 374 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ART3Q13508 389 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 MAPK11Q15759 364 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ZNF141Q15928 474 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 BCL2A1Q16548 175 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 SPDYE7PQ495Y7 208 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 WIPI1Q5MNZ9 446 aaPredicted RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 DCST1Q5T197 706 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 DCST2Q5T1A1 773 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.49□□□□□ -1.21
NEK3-209ENST00000618856 LRIF1Q5T3J3 769 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 CCNJQ5T5M9 372 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 METTL21CQ5VZV1 264 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 NXNQ6DKJ4 435 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 XKRXQ6PP77 449 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 SEM1Q6ZVN7 128 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 MTERF4Q7Z6M4 381 aaKnown RBP7.49□□□□□ -1.21
NEK3-209ENST00000618856 MARCH3Q86UD3 253 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 MISPQ8IVT2 679 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 ULK2Q8IYT8 1036 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 EID3Q8N140 333 aa7.49□□□□□ -1.21
NEK3-209ENST00000618856 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms