RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 LRRTM1Q86UE6 522 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 IL17RCQ8NAC3 791 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 RAD9AQ99638 391 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 TOLLIPQ9H0E2 274 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 DDX31Q9H8H2 851 aaKnown RBP12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 CRTAC1Q9NQ79 661 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 GNG8Q9UK08 70 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC6A14Q9UN76 642 aa12.79□□□□□ -0.36
PPP4R3B-205ENST00000616288 TRDV1A0A1B0GX56 115 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR6C68A6NDL8 312 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 LDB2O43679 373 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC1A3P43003 542 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 CLDN12P56749 244 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF33AQ06730 810 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 FAM26DQ5JW98 314 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR6J1Q8NGC5 347 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 WNT2BQ93097 391 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SHARPINQ9H0F6 387 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 HS3ST4Q9Y661 456 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 URADA6NGE7 173 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 UBL3O95164 117 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 AFF3P51826 1226 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 TAS2R50P59544 299 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 RNF4P78317 190 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 IL10RBQ08334 325 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 MPEG1Q2M385 716 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 ACSM3Q53FZ2 586 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 GPRIN1Q7Z2K8 1008 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 NXPE1Q8N323 547 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR4C6Q8NH72 309 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMIM14Q96QK8 99 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 MAP3K3Q99759 626 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 ATF6BQ99941 703 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SULT4A1Q9BR01 284 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 ALG8Q9BVK2 526 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 BTBD17A6NE02 478 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 M0R3H8 397 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 CD34P28906 385 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC14A1Q13336 389 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 UBXN11Q5T124 520 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 CPOQ8IVL8 374 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR2L2Q8NH16 312 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMOQ99835 787 aa12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 PDGFDQ9GZP0 370 aaPredicted RBP12.78□□□□□ -0.36
PPP4R3B-205ENST00000616288 SMCHD1A6NHR9 2005 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 A0A0B4J2A0 478 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 GGT3PA6NGU5 568 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 ST8SIA5O15466 376 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 FGBP02675 491 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 HPXP02790 462 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 KLK1P06870 262 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 PCGF2P35227 344 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 HSD17B2P37059 387 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 PON3Q15166 354 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 ALKBH2Q6NS38 261 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 OVCH2Q7RTZ1 564 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 DCUN1D4Q92564 292 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 SCMH1Q96GD3 660 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 OR2M4Q96R27 311 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 METTL8Q9H825 291 aaKnown RBP12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 ZFP64Q9NPA5 681 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 MEPEQ9NQ76 525 aaPredicted RBP12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 TMEM248Q9NWD8 314 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 SHPKQ9UHJ6 478 aa12.77□□□□□ -0.36
PPP4R3B-205ENST00000616288 TMEM72A0PK05 275 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 NDUFA2O43678 99 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 PCSK2P16519 638 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.374e-17■■■■■ 57.3
PPP4R3B-205ENST00000616288 MAT2AP31153 395 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 OR10A3P58181 314 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 KIAA1211LQ6NV74 962 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 SYT9Q86SS6 491 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 NRROSQ86YC3 692 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 PHOSPHO1Q8TCT1 267 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 RHOVQ96L33 236 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 RBM14Q96PK6 669 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 SLC25A18Q9H1K4 315 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 ZCCHC3Q9NUD5 404 aaKnown RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 CXXC1Q9P0U4 656 aaPredicted RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 WDR45Q9Y484 360 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 MFSD2BA6NFX1 497 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 LGALS2P05162 132 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 ACP2P11117 423 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 HFEQ30201 348 aa12.77□□□□□ -0.37
PPP4R3B-205ENST00000616288 OR2B11Q5JQS5 317 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms