RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TCTN2Q96GX1 697 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 PEX11GQ96HA9 241 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 SPACA7Q96KW9 195 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 SDF2Q99470 211 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 GPA33Q99795 319 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 ARHGDIGQ99819 225 aa17.8■□□□□ 0.44
MMP28-204ENST00000615136 POLDIP3Q9BY77 421 aaKnown RBP17.8■□□□□ 0.44
MMP28-204ENST00000615136 RPL36Q9Y3U8 105 aaKnown RBP17.8■□□□□ 0.44
MMP28-204ENST00000615136 TMEM184BQ9Y519 407 aaPredicted RBP17.8■□□□□ 0.44
MMP28-204ENST00000615136 DUXAA6NLW8 204 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SYT5O00445 386 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 PLOD3O60568 738 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 UPK1BO75841 260 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SCG5P05408 212 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 ENDOUP21128 410 aaKnown RBP17.79■□□□□ 0.44
MMP28-204ENST00000615136 AVPR1BP47901 424 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.79■□□□□ 0.44
MMP28-204ENST00000615136 KCNAB1Q14722 419 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 ARHGAP11BQ3KRB8 267 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SLC25A30Q5SVS4 291 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 DNASE2BQ8WZ79 361 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 TMEM80Q96HE8 168 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 C6orf62Q9GZU0 229 aaPredicted RBP17.79■□□□□ 0.44
MMP28-204ENST00000615136 VPS13AQ96RL7 3174 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 NPIPA5A0A0B4J1W7 369 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 A0A1B0GVT2 93 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SAGE2PA6NJ88 616 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 NPIPA7E9PJI5 369 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 HRKO00198 91 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 NPIPA8P0DM63 369 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 PRKCDQ05655 676 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 MAPK14Q16539 360 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 ENTPD8Q5MY95 495 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SLC25A45Q8N413 288 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 FAM26EQ8N5C1 309 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 DEFB123Q8N688 67 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 TCEANCQ8N8B7 351 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 CTHRC1Q96CG8 243 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.79■□□□□ 0.44
MMP28-204ENST00000615136 CALML5Q9NZT1 146 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 KCNE5Q9UJ90 142 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 SIT1Q9Y3P8 196 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 WDR45Q9Y484 360 aa17.79■□□□□ 0.44
MMP28-204ENST00000615136 A0A087WV62 115 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 ISPDA4D126 451 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 CPSF4LA6NMK7 179 aaKnown RBP17.78■□□□□ 0.44
MMP28-204ENST00000615136 BCAT2O15382 392 aaPredicted RBP17.78■□□□□ 0.44
MMP28-204ENST00000615136 SRPX2O60687 465 aaPredicted RBP17.78■□□□□ 0.44
MMP28-204ENST00000615136 CBX7O95931 251 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 OR1D5P58170 312 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 GPR68Q15743 365 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 INAVAQ3KP66 663 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 NR4A3Q92570 626 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 FGF11Q92914 225 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 SPRTNQ9H040 489 aaPredicted RBP17.78■□□□□ 0.44
MMP28-204ENST00000615136 PIGUQ9H490 435 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 CAPN10Q9HC96 672 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 HHATLQ9HCP6 504 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 SEMA4GQ9NTN9 838 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 SOHLH2Q9NX45 425 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 LRIT1Q9P2V4 623 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 CFL2Q9Y281 166 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 ZNF443Q9Y2A4 671 aaPredicted RBP17.78■□□□□ 0.44
MMP28-204ENST00000615136 CLDN16Q9Y5I7 305 aa17.78■□□□□ 0.44
MMP28-204ENST00000615136 KIAA0513O60268 411 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 CSO75390 466 aaKnown RBP17.77■□□□□ 0.44
MMP28-204ENST00000615136 TNNI3P19429 210 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 MLLT3P42568 568 aaPredicted RBP17.77■□□□□ 0.44
MMP28-204ENST00000615136 FNTBP49356 437 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 PCYT1AP49585 367 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 BTG2P78543 158 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 PRPF38BQ5VTL8 546 aaKnown RBP17.77■□□□□ 0.44
MMP28-204ENST00000615136 ZC3H14Q6PJT7 736 aaKnown RBP17.77■□□□□ 0.44
MMP28-204ENST00000615136 ZNF836Q6ZNA1 936 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 CYP4Z2PQ8N1L4 340 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 IQCF1Q8N6M8 205 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 MND1Q9BWT6 205 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 TSSK6Q9BXA6 273 aa17.77■□□□□ 0.44
MMP28-204ENST00000615136 GXYLT2A0PJZ3 443 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 HYKKA2RU49 373 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 PRKYO43930 277 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 THY1P04216 161 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 GIMD1P0DJR0 217 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 DMDP11532 3685 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 GSTM3P21266 225 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 S1PR1P21453 382 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 PRKAR1BP31321 381 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 MAP3K8P41279 467 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 CDK5Q00535 292 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 ZNF45Q02386 682 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 CFHR1Q03591 330 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 ZNF181Q2M3W8 571 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 DCST2Q5T1A1 773 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 FIGNL1Q6PIW4 674 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 SLC36A4Q6YBV0 504 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 ZAR1Q86SH2 424 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 LYSMD2Q8IV50 215 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 DIO2Q92813 273 aa17.77■□□□□ 0.43
MMP28-204ENST00000615136 UGT2A1Q9Y4X1 527 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms