RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 BARX1Q9HBU1 254 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DNAJC27Q9NZQ0 273 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 LAMP5Q9UJQ1 280 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 PLEKHM1Q9Y4G2 1056 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DNAJC15Q9Y5T4 150 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 PRAMEF33A0A0G2JMD5 474 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 EIF3FO00303 357 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TLX2O43763 284 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TIMM8AO60220 97 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 PRAMEF10O60809 474 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 EEDO75530 441 aaKnown RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 OR10J4P0C629 311 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TBPL1P62380 186 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 NNATQ16517 81 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 SERPINA12Q8IW75 414 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ARL14Q8N4G2 192 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 KLHDC7BQ96G42 594 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 LIN28AQ9H9Z2 209 aaKnown RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 RNF6Q9Y252 685 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 SMIM30A4D0T7 59 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ADAM12O43184 909 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ZNF821O75541 412 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TPOP07202 933 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 BMPR1AP36894 532 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 CST9Q5W186 159 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 XKR5Q6UX68 686 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 LILRB2Q8N423 598 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ZNF439Q8NDP4 499 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 CREB3L1Q96BA8 519 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 MUS81Q96NY9 551 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 CD180Q99467 661 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 PFDN5Q99471 154 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TUBA1CQ9BQE3 449 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 AKIRIN1Q9H9L7 192 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 AHDC1Q5TGY3 1603 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DIDO1Q9BTC0 2240 aaKnown RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DNASE2O00115 360 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 IFNA5P01569 189 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 IFNA17P01571 189 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ZNF14P17017 642 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 BMP8BP34820 402 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ETV4P43268 484 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TGM4P49221 684 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 RPS26P62854 115 aaKnown RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 HSF1Q00613 529 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 LSAMPQ13449 338 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 BMP8AQ7Z5Y6 402 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 OR4C15Q8NGM1 316 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 OR5P2Q8WZ92 322 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 F2RL3Q96RI0 385 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DPH2Q9BQC3 489 aaPredicted RBP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 GFOD1Q9NXC2 390 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 WDR45Q9Y484 360 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 GABRR3A8MPY1 467 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ASGR2P07307 311 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 S100A7P31151 101 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TIA1P31483 386 aaKnown RBP eCLIP8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 SOX9P48436 509 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DCDC1P59894 354 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 TRAM2Q15035 370 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 CHRFAM7AQ494W8 412 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 DEFB134Q4QY38 66 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ISCA2Q86U28 154 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 IL1F10Q8WWZ1 152 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 HRASLSQ9HDD0 168 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 QPCTLQ9NXS2 382 aa8.97□□□□□ -0.97
SRGAP2B-204ENST00000612199 ENTPD6O75354 484 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 MATN1P21941 496 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 UQCRC2P22695 453 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 SFTPDP35247 375 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 SHISA6Q6ZSJ9 500 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 ASRGL1Q7L266 308 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 BBS10Q8TAM1 723 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 TSACCQ96A04 125 aaPredicted RBP8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 ZNF559Q9BR84 538 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 HERC2P3Q9BVR0 1158 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 AASSQ9UDR5 926 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 SOCS7O14512 581 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 GPR37L1O60883 481 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 ADH1BP00325 375 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 IL3P08700 152 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 HSD17B1P14061 328 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 PTGER4P35408 488 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 DPP6P42658 865 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 FAM189BP81408 668 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 TSTQ16762 297 aaKnown RBP8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 TRNP1Q6NT89 227 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 KDM1BQ8NB78 822 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 TMEM174Q8WUU8 243 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 TAAR8Q969N4 342 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 CHFRQ96EP1 664 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 SLC2A11Q9BYW1 496 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 C2orf42Q9NWW7 574 aa8.96□□□□□ -0.97
SRGAP2B-204ENST00000612199 LOC105369274A0A096LPK9 316 aa8.96□□□□□ -0.98
SRGAP2B-204ENST00000612199 ZNF705EA8MWA4 302 aaPredicted RBP8.96□□□□□ -0.98
SRGAP2B-204ENST00000612199 H0YIV9 168 aa8.96□□□□□ -0.98
SRGAP2B-204ENST00000612199 GATCO43716 136 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms