RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 HIPK1Q86Z02 1210 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZDHHC21Q8IVQ6 265 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 OFCC1Q8IZS5 231 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ARMC10Q8N2F6 343 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 LRRC25Q8N386 305 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF843Q8N446 348 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 RBMXL3Q8N7X1 1067 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 OR5L2Q8NGL0 311 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 PNPLA2Q96AD5 504 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 EXOSC8Q96B26 276 aaKnown RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CNRIP1Q96F85 164 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF764Q96H86 408 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF681Q96N22 645 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 MUS81Q96NY9 551 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CNPPD1Q9BV87 410 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 TOR3AQ9H497 397 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CDCP1Q9H5V8 836 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 CXorf21Q9HAI6 301 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 SMURF2Q9HAU4 748 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZBTB20Q9HC78 741 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 MIEF1Q9NQG6 463 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 FAM118AQ9NWS6 357 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 SH3BP4Q9P0V3 963 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF223Q9UK11 482 aaPredicted RBP8.17□□□□□ -1.1
SMAD4-217ENST00000611848 ERVK-19Q9WJR5 959 aa8.17□□□□□ -1.1
SMAD4-217ENST00000611848 SVILO95425 2214 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 KALRNO60229 2985 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 A0A1W2PS29 197 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 B8ZZF3 427 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 TBX19O60806 448 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 C1QL1O75973 258 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF682O95780 498 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 NT5EP21589 574 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 MPIP34949 423 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 PCGF2P35227 344 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 HLCSP50747 726 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 MLF1P58340 268 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 FUT7Q11130 342 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 MAP4K2Q12851 820 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 MPEG1Q2M385 716 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 RFX4Q33E94 735 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 ZIK1Q3SY52 487 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 IQCCQ4KMZ1 466 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 LRRC23Q53EV4 343 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 FCRLBQ6BAA4 426 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 Q6ZS92 163 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 THAP5Q7Z6K1 395 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 OR7G1Q8NGA0 311 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 OR4A15Q8NGL6 344 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 NUBPLQ8TB37 319 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 PNPT1Q8TCS8 783 aaKnown RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF675Q8TD23 568 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 PPCDCQ96CD2 204 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 NMD3Q96D46 503 aaKnown RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 NRBF2Q96F24 287 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 BBS4Q96RK4 519 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 TRIM4Q9C037 500 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 AMBRA1Q9C0C7 1298 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 VCX3AQ9NNX9 186 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 DDX18Q9NVP1 670 aaKnown RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 TMEFF2Q9UIK5 374 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 CFL2Q9Y281 166 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 B3GNT3Q9Y2A9 372 aa8.16□□□□□ -1.1
SMAD4-217ENST00000611848 HEMK1Q9Y5R4 338 aaPredicted RBP8.16□□□□□ -1.1
SMAD4-217ENST00000611848 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 TRAV17A0A0B4J275 112 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR5H15A6NDH6 313 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR6C76A6NM76 312 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 MYO1GB0I1T2 1018 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 TMEM229AB2RXF0 380 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 SLC16A6O15403 523 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 TNFRSF21O75509 655 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 GCM2O75603 506 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 SLITRK5O94991 958 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 WDPCPO95876 746 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 FABP3P05413 133 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ETS2P15036 469 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 EFNA1P20827 205 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 NTSP30990 170 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 CASRP41180 1078 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 CDK9P50750 372 aaKnown RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 CRYBA2P53672 197 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 SLC37A1P57057 533 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 HBA1P69905 142 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 RNF4P78317 190 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 RBBP4Q09028 425 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 IL18R1Q13478 541 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ELOAQ14241 798 aaKnown RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 PRSS53Q2L4Q9 553 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 PRICKLE4Q2TBC4 344 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ZNF750Q32MQ0 723 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 ZBED5Q49AG3 693 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 RBM48Q5RL73 367 aaKnown RBP8.15□□□□□ -1.1
SMAD4-217ENST00000611848 SLC6A19Q695T7 634 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 OR2T5Q6IEZ7 315 aa8.15□□□□□ -1.1
SMAD4-217ENST00000611848 SLC29A4Q7RTT9 530 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms