RNA–Protein interactions for RNA: ENST00000607923.5

CTCFL-213, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-213ENST00000607923 GRHL3Q8TE85 626 aa12.86□□□□□ -0.35
CTCFL-213ENST00000607923 APOOQ9BUR5 198 aa12.86□□□□□ -0.35
CTCFL-213ENST00000607923 NT5DC2Q9H857 520 aa12.86□□□□□ -0.35
CTCFL-213ENST00000607923 TRIM45Q9H8W5 580 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-213ENST00000607923 BCL2L10Q9HD36 194 aa12.86□□□□□ -0.35
CTCFL-213ENST00000607923 HINT3Q9NQE9 182 aaKnown RBP12.86□□□□□ -0.35
CTCFL-213ENST00000607923 GUCY1B2O75343 617 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 RASGRP1O95267 797 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 IFNGR2P38484 337 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 RAB40BQ12829 278 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 GNA13Q14344 377 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 C3orf38Q5JPI3 329 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 GDPGP1Q6ZNW5 385 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 SIRT6Q8N6T7 355 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 PTGFRNQ9P2B2 879 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 A0A1W2PPK0 400 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 CACNB4O00305 520 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 PEX12O00623 359 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 P2RX6O15547 441 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 IL1AP01583 271 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 GYPBP06028 91 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 ENDOUP21128 410 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 FCARP24071 287 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 EXOSC7Q15024 291 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MLC1Q15049 377 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MAPK14Q16539 360 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MRM1Q6IN84 353 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 CYB561A3Q8NBI2 242 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 OR5T3Q8NGG3 340 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 TMEM106CQ9BVX2 250 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 SRMSQ9H3Y6 488 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MAT2BQ9NZL9 334 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
CTCFL-213ENST00000607923 MRPS2Q9Y399 296 aaKnown RBP12.85□□□□□ -0.35
CTCFL-213ENST00000607923 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 LOC102723532A0A0G2JNH3 316 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SNTNA6NMZ2 147 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 INPP1P49441 399 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CTBP2P56545 445 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ZNF542PQ5EBM4 170 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 IDNKQ5T6J7 187 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ZNF836Q6ZNA1 936 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 Q8N402 240 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 C19orf18Q8NEA5 215 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 OR10H4Q8NGA5 316 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 OR51A7Q8NH64 312 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 FGF14Q92915 247 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 HCAR1Q9BXC0 346 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CACYBPQ9HB71 228 aaKnown RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SF3B6Q9Y3B4 125 aaKnown RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 IQCMA0A1B0GVH7 501 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CENPXA8MT69 81 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 GABRPO00591 440 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CASC3O15234 703 aaKnown RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 CLUP10909 449 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 RPS21P63220 83 aaKnown RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 PRRT3Q5FWE3 981 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 FRRS1Q6ZNA5 592 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ZNF681Q96N22 645 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SLC22A4Q9H015 551 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 NLKQ9UBE8 527 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ZNF443Q9Y2A4 671 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 PCDHGB2Q9Y5G2 931 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 SURF4O15260 269 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 IFI30P13284 250 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 NAT1P18440 290 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 NT5EP21589 574 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 C5AR1P21730 350 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 MYL9P24844 172 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 RUNX2Q13950 521 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-213ENST00000607923 TMEM64Q6YI46 380 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 QSOX2Q6ZRP7 698 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
CTCFL-213ENST00000607923 ASB18Q6ZVZ8 466 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms