RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PRR5P85299 388 aa19■□□□□ 0.63
PNKP-212ENST00000599454 TMEM44Q2T9K0 475 aa19■□□□□ 0.63
PNKP-212ENST00000599454 TIFABQ6ZNK6 161 aa19■□□□□ 0.63
PNKP-212ENST00000599454 SH2D5Q6ZV89 423 aa19■□□□□ 0.63
PNKP-212ENST00000599454 MARCH3Q86UD3 253 aa19■□□□□ 0.63
PNKP-212ENST00000599454 TMEM171Q8WVE6 324 aa19■□□□□ 0.63
PNKP-212ENST00000599454 L3HYPDHQ96EM0 354 aa19■□□□□ 0.63
PNKP-212ENST00000599454 GMPPAQ96IJ6 420 aaPredicted RBP19■□□□□ 0.63
PNKP-212ENST00000599454 PRRG4Q9BZD6 226 aa19■□□□□ 0.63
PNKP-212ENST00000599454 CXorf56Q9H5V9 222 aa19■□□□□ 0.63
PNKP-212ENST00000599454 COL6A5A8TX70 2615 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 SONP18583 2426 aaKnown RBP18.99■□□□□ 0.63
PNKP-212ENST00000599454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.99■□□□□ 0.63
PNKP-212ENST00000599454 KIAA1324LA8MWY0 1029 aaPredicted RBP18.99■□□□□ 0.63
PNKP-212ENST00000599454 AQP8O94778 261 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 IL11P20809 199 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 PRKAA2P54646 552 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 CTBP2P56545 445 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 BTKQ06187 659 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 EXOC3L2Q2M3D2 409 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 ANKRD34AQ69YU3 496 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 FAM71E1Q6IPT2 247 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 C22orf34Q6ZV56 151 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 GGNQ86UU5 652 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 FAM76AQ8TAV0 307 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 ELP4Q96EB1 424 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 GLIPR2Q9H4G4 154 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 MYNNQ9NPC7 610 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 GLRX2Q9NS18 164 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 ZNF701Q9NV72 531 aaPredicted RBP18.99■□□□□ 0.63
PNKP-212ENST00000599454 FREM1Q5H8C1 2179 aa18.99■□□□□ 0.63
PNKP-212ENST00000599454 ATRQ13535 2644 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 A0A087WZY1 265 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 KLF4O43474 513 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 KCNH1O95259 989 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 UTS2O95399 124 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 ANGPTL1O95841 491 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 PLGP00747 810 aaPredicted RBP18.98■□□□□ 0.63
PNKP-212ENST00000599454 THBDP07204 575 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 PRSS53Q2L4Q9 553 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 SPDYAQ5MJ70 313 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 ZNF704Q6ZNC4 412 aaPredicted RBP18.98■□□□□ 0.63
PNKP-212ENST00000599454 CDC26Q8NHZ8 85 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.98■□□□□ 0.63
PNKP-212ENST00000599454 AMDHD1Q96NU7 426 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 OR10A4Q9H209 315 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 MCTS1Q9ULC4 181 aaKnown RBP18.98■□□□□ 0.63
PNKP-212ENST00000599454 TIMM22Q9Y584 194 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 FBN3Q75N90 2809 aa18.98■□□□□ 0.63
PNKP-212ENST00000599454 ABCA1O95477 2261 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 EXOC1LA0A1B0GW35 172 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 INAFM1C9JVW0 142 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 EIF1AYO14602 144 aaKnown RBP18.97■□□□□ 0.63
PNKP-212ENST00000599454 SS18L1O75177 396 aaPredicted RBP18.97■□□□□ 0.63
PNKP-212ENST00000599454 EIF1AXP47813 144 aaKnown RBP18.97■□□□□ 0.63
PNKP-212ENST00000599454 IMPG1Q17R60 797 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.97■□□□□ 0.63
PNKP-212ENST00000599454 STAC2Q6ZMT1 411 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 BEND4Q6ZU67 534 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 IKBIPQ70UQ0 350 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 WDR75Q8IWA0 830 aaKnown RBP18.97■□□□□ 0.63
PNKP-212ENST00000599454 MDFIQ99750 246 aa18.97■□□□□ 0.63
PNKP-212ENST00000599454 H3BQF6 201 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 GABRA3P34903 492 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 RFX3P48380 749 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 NAA20P61599 178 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 PPP4R4Q6NUP7 873 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 STK32CQ86UX6 486 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 CNPY4Q8N129 248 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 MMGT1Q8N4V1 131 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 ZNF611Q8N823 705 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 LRRN4CLQ8ND94 238 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 IFT81Q8WYA0 676 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 KCNA7Q96RP8 456 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 MID1IP1Q9NPA3 183 aa18.96■□□□□ 0.63
PNKP-212ENST00000599454 C7orf72A4D263 438 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 HS3ST1O14792 307 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 NGFRP08138 427 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 ABHD2P08910 425 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 SLC6A8P48029 635 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 GRAMD1BQ3KR37 738 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 VPS26BQ4G0F5 336 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 GTPBP8Q8N3Z3 284 aaPredicted RBP18.95■□□□□ 0.62
PNKP-212ENST00000599454 OR10D3Q8NH80 312 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 ACMSDQ8TDX5 336 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 HOXB13Q92826 284 aaPredicted RBP18.95■□□□□ 0.62
PNKP-212ENST00000599454 ZBTB8AQ96BR9 441 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 CCDC126Q96EE4 140 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 METTL2AQ96IZ6 378 aaKnown RBP18.95■□□□□ 0.62
PNKP-212ENST00000599454 ADGRG7Q96K78 797 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 TMEM204Q9BSN7 226 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 GSTO2Q9H4Y5 243 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 VDAC3Q9Y277 283 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 GPR52Q9Y2T5 361 aa18.95■□□□□ 0.62
PNKP-212ENST00000599454 ALG1L2C9J202 215 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 ADAMDEC1O15204 470 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 RSL1D1O76021 490 aaKnown RBP18.94■□□□□ 0.62
PNKP-212ENST00000599454 SYNGR4O95473 234 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 GSTA1P08263 222 aa18.94■□□□□ 0.62
PNKP-212ENST00000599454 ECHS1P30084 290 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms