RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 VPS26BQ4G0F5 336 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 UNC50Q53HI1 259 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 TCHHL1Q5QJ38 904 aaPredicted RBP15.29■□□□□ 0.04
PNKP-210ENST00000597965 GTF2IRD2BQ6EKJ0 949 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 TIFABQ6ZNK6 161 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 BEND4Q6ZU67 534 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 SH2D5Q6ZV89 423 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 ZNF550Q7Z398 422 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 GTF2IRD2Q86UP8 949 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 OR2L13Q8N349 312 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 CIARTQ8N365 385 aaPredicted RBP15.29■□□□□ 0.04
PNKP-210ENST00000597965 CCDC126Q96EE4 140 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 MARK4Q96L34 752 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 TMEM237Q96Q45 408 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 OR10A4Q9H209 315 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
PNKP-210ENST00000597965 IGLV3-32A0A0A0MS00 114 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 EXOC1LA0A1B0GW35 172 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 NME6O75414 186 aaPredicted RBP15.28■□□□□ 0.04
PNKP-210ENST00000597965 CNOT4O95628 575 aaKnown RBP15.28■□□□□ 0.04
PNKP-210ENST00000597965 CHN1P15882 459 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 IL11P20809 199 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 PCSK6P29122 969 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 PRKAA2P54646 552 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 CLDN20P56880 219 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 PRR5P85299 388 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 BTKQ06187 659 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 TMEM107Q6UX40 140 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 IKBIPQ70UQ0 350 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 WDR75Q8IWA0 830 aaKnown RBP15.28■□□□□ 0.04
PNKP-210ENST00000597965 L3HYPDHQ96EM0 354 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 METTL2AQ96IZ6 378 aaKnown RBP15.28■□□□□ 0.04
PNKP-210ENST00000597965 LMF2Q9BU23 707 aaKnown RBP15.28■□□□□ 0.04
PNKP-210ENST00000597965 EBPLQ9BY08 206 aa15.28■□□□□ 0.04
PNKP-210ENST00000597965 B4DXG7 233 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 H0YC42 278 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 UPK1AO00322 258 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 DLX3O60479 287 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 PSMG1O95456 288 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 SYNGR4O95473 234 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 ANGPTL1O95841 491 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 ME2P23368 584 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 EIF1AXP47813 144 aaKnown RBP15.27■□□□□ 0.04
PNKP-210ENST00000597965 TPD52P55327 224 aaPredicted RBP15.27■□□□□ 0.04
PNKP-210ENST00000597965 EXOC3L2Q2M3D2 409 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 BEND6Q5SZJ8 279 aaPredicted RBP15.27■□□□□ 0.04
PNKP-210ENST00000597965 PDSS1Q5T2R2 415 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 PPP4R4Q6NUP7 873 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 MTERF4Q7Z6M4 381 aaKnown RBP15.27■□□□□ 0.04
PNKP-210ENST00000597965 MARCH3Q86UD3 253 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 EXOC3L1Q86VI1 746 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 CDC26Q8NHZ8 85 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 PPP1R14CQ8TAE6 165 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 IFT81Q8WYA0 676 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 ZBTB8AQ96BR9 441 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 ELP4Q96EB1 424 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 HS3ST6Q96QI5 342 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 MYNNQ9NPC7 610 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 SNX8Q9Y5X2 465 aa15.27■□□□□ 0.04
PNKP-210ENST00000597965 TLN2Q9Y4G6 2542 aa15.27■□□□□ 0.03
PNKP-210ENST00000597965 RAI1Q7Z5J4 1906 aaPredicted RBP15.27■□□□□ 0.03
PNKP-210ENST00000597965 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 TRIM64BA6NI03 449 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 EIF1AYO14602 144 aaKnown RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 SS18L1O75177 396 aaPredicted RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 ERLIN1O75477 346 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 UTS2O95399 124 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 GSTA1P08263 222 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 PABPC4LP0CB38 370 aaKnown RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 GABRA3P34903 492 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 RFX3P48380 749 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 ETFDHQ16134 617 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 ANKRD34AQ69YU3 496 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 FAM71E1Q6IPT2 247 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 ZNF704Q6ZNC4 412 aaPredicted RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 ZNF611Q8N823 705 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 OR5M1Q8NGP8 315 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 CEP70Q8NHQ1 597 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 ACMSDQ8TDX5 336 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 AMDHD1Q96NU7 426 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 HDHD5Q9BXW7 423 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 GLIPR2Q9H4G4 154 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 NGBQ9NPG2 151 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 ZNF701Q9NV72 531 aaPredicted RBP15.26■□□□□ 0.03
PNKP-210ENST00000597965 TMEM216Q9P0N5 145 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 GPR52Q9Y2T5 361 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 HEATR5AQ86XA9 2040 aa15.26■□□□□ 0.03
PNKP-210ENST00000597965 NDUFB5O43674 189 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 CRCPO75575 148 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 AQP8O94778 261 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 NGFRP08138 427 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 HPGDP15428 266 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 LOXP28300 417 aaPredicted RBP15.25■□□□□ 0.03
PNKP-210ENST00000597965 ZNF41P51814 821 aaPredicted RBP15.25■□□□□ 0.03
PNKP-210ENST00000597965 TMEM44Q2T9K0 475 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 ESPNLQ6ZVH7 1005 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 GGNQ86UU5 652 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 PRIMA1Q86XR5 153 aa15.25■□□□□ 0.03
PNKP-210ENST00000597965 MISPQ8IVT2 679 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms