RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 SNRPB2P08579 225 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 CELA3AP09093 270 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 CD1EP15812 388 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 ABOP16442 354 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 TBXA2RP21731 343 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 PTPN6P29350 595 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 GAS1P54826 345 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 SRSF1Q07955 248 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 ARHGAP11BQ3KRB8 267 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 FLYWCH1Q4VC44 716 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 PAGE3Q5JUK9 113 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 OR5M10Q6IEU7 315 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 MARCH3Q86UD3 253 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 OR4K17Q8NGC6 315 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 OR4C3Q8NH37 302 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 TSPEARQ8WU66 669 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 AURKBQ96GD4 344 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 RAD21L1Q9H4I0 556 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 SLC52A3Q9NQ40 469 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 SAR1AQ9NR31 198 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 NDUFAF1Q9Y375 327 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 LIPGQ9Y5X9 500 aa17.94■□□□□ 0.46
SHKBP1-214ENST00000597396 NPIPA5A0A0B4J1W7 369 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 A0A1B0GTH9 108 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 NPIPA7E9PJI5 369 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 HMGN4O00479 90 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 STX11O75558 287 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 CBR3O75828 277 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 ANGPTL1O95841 491 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 IGHG3P01860 377 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 NGFRP08138 427 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 NPIPA8P0DM63 369 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 DRD4P21917 467 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 DCTP40126 519 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 CRATP43155 626 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 HPCAP84074 193 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 KLF10Q13118 480 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 GPAT3Q53EU6 434 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 COX20Q5RI15 118 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 LRIF1Q5T3J3 769 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 HEPHL1Q6MZM0 1159 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 ARHGAP11AQ6P4F7 1023 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 TRILQ7L0X0 811 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 WDSUB1Q8N9V3 476 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNF527Q8NB42 609 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 HOXD1Q9GZZ0 328 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 UBQLN3Q9H347 655 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 HHATLQ9HCP6 504 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 PLSCR2Q9NRY7 297 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 MYO7BQ6PIF6 2116 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 LRRK2Q5S007 2527 aa17.93■□□□□ 0.46
SHKBP1-214ENST00000597396 TRGV5A0A0B4J1U4 118 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ALG1L2C9J202 215 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 CLIC1O00299 241 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNHIT1O43257 154 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 NDUFB5O43674 189 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 PTGS2P35354 604 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 MAGEA8P43361 318 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 CASP6P55212 293 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 C17orf67Q0P5P2 114 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 MAPRE2Q15555 327 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 GPR68Q15743 365 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 APOOLQ6UXV4 268 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNF614Q8N883 585 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 GATSQ8NAP1 163 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 DUSP19Q8WTR2 217 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ROPN1LQ96C74 230 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 SLC6A15Q9H2J7 730 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 DSN1Q9H410 356 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 ACKR4Q9NPB9 350 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 DKKL1Q9UK85 242 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 HRH3Q9Y5N1 445 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 CAPN7Q9Y6W3 813 aa17.92■□□□□ 0.46
SHKBP1-214ENST00000597396 DIDO1Q9BTC0 2240 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 C17orf51A8MQB3 221 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 HCN1O60741 890 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 SLC19A2O60779 497 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 CCDC22O60826 627 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 HPNP05981 417 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 PPIBP23284 216 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 ADSLP30566 484 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 ATP12AP54707 1039 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 DSTNP60981 165 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 OLIG3Q7RTU3 272 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 DHDDSQ86SQ9 333 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 SPPL2CQ8IUH8 684 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 RTN4RQ9BZR6 473 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 NMUR2Q9GZQ4 415 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 ZNF350Q9GZX5 532 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 POLE3Q9NRF9 147 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 SLC25A37Q9NYZ2 338 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 MED11Q9P086 117 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 SLAMF8Q9P0V8 285 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 FBXL2Q9UKC9 423 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 MKLN1Q9UL63 735 aa17.91■□□□□ 0.46
SHKBP1-214ENST00000597396 LIPT1Q9Y234 373 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms