RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 HSF2Q03933 536 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 TGM3Q08188 693 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 STXBP2Q15833 593 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC26Q2I0M4 334 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 HNRNPA1L2Q32P51 320 aaKnown RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF829Q3KNS6 432 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ZC2HC1BQ5TFG8 222 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 NCR3LG1Q68D85 454 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 TMEM207Q6UWW9 146 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 PAQR9Q6ZVX9 377 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 G2E3Q7L622 706 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 CDR2LQ86X02 465 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 HOGA1Q86XE5 327 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 GRAMD2AQ8IUY3 354 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 LACC1Q8IV20 430 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 MISPQ8IVT2 679 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 CLEC1AQ8NC01 280 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ANGPTL6Q8NI99 470 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 VANGL1Q8TAA9 524 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 LKAAEAR1Q8TD35 194 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 DQX1Q8TE96 717 aaKnown RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ASZ1Q8WWH4 475 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 KIFAP3Q92845 792 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ST6GALNAC6Q969X2 333 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 HAVCR1Q96D42 359 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 SENP8Q96LD8 212 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 BTBD9Q96Q07 612 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 SYT15Q9BQS2 421 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 CLEC7AQ9BXN2 247 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 TDRD1Q9BXT4 1180 aaKnown RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 GON7Q9BXV9 100 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 FRMD8P1Q9BZ68 369 aaPredicted RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ZMYND12Q9H0C1 365 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 ATP13A3Q9H7F0 1226 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 FKBP14Q9NWM8 211 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 SLC39A1Q9NY26 324 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 POLLQ9UGP5 575 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 WDR83OSQ9Y284 106 aa4.26□□□□□ -1.73
SMAD4-216ENST00000593223 EXOGQ9Y2C4 368 aaKnown RBP4.26□□□□□ -1.73
SMAD4-216ENST00000593223 A0A1B0GUL7 405 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 BTBD17A6NE02 478 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PCP4L1A6NKN8 68 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 IQCF5A8MTL0 148 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SUPT3HB4E1H0 165 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF195O14628 629 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 HDAC3O15379 428 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ZNF264O43296 627 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 AKR7A2O43488 359 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 LANCL1O43813 399 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ECE2O60344 883 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 GLRA3O75311 464 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SNNO75324 88 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CSO75390 466 aaKnown RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OR5F1O95221 314 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OR6A2O95222 327 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PGLSO95336 258 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 NDUFB10O96000 172 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 KRT6AP02538 564 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SERPINF2P08697 491 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PABPC4LP0CB38 370 aaKnown RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 LHCGRP22888 699 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 HTR2AP28223 471 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 EVI2BP34910 448 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ARPC4P59998 168 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PTENP60484 403 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ANGPT1Q15389 498 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SNCBQ16143 134 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 BCL2A1Q16548 175 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PDLIM3Q53GG5 364 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 LRRC38Q5VT99 294 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 TRIM65Q6PJ69 517 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 B3GLCTQ6Y288 498 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PTAR1Q7Z6K3 402 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 VTCN1Q7Z7D3 282 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 PAQR7Q86WK9 346 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 KATNAL2Q8IYT4 538 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OFCC1Q8IZS5 231 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CERS5Q8N5B7 392 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 TRPV3Q8NET8 790 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SPATA4Q8NEY3 305 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OR9K2Q8NGE7 335 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OR5AP2Q8NGF4 316 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CD300LFQ8TDQ1 290 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 RAD54LQ92698 747 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 MUS81Q96NY9 551 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
SMAD4-216ENST00000593223 C19orf43Q9BQ61 176 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ALG12Q9BV10 488 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SPATA16Q9BXB7 569 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 NMNAT2Q9BZQ4 307 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 SHARPINQ9H0F6 387 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 HDHD2Q9H0R4 259 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 NAPBQ9H115 298 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 BLZF1Q9H2G9 400 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 RGCCQ9H4X1 137 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 TLE6Q9H808 572 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 MAGEF1Q9HAY2 307 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 KCNMB3Q9NPA1 279 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 CHRAC1Q9NRG0 131 aa4.25□□□□□ -1.73
SMAD4-216ENST00000593223 ZDHHC18Q9NUE0 388 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms