RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PANX1Q96RD7 426 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 HOXD1Q9GZZ0 328 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 TCF7L2Q9NQB0 619 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 UBQLN4Q9NRR5 601 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 DUSP22Q9NRW4 184 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 EXD2Q9NVH0 621 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 GIN1Q9NXP7 522 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 FLRT3Q9NZU0 649 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 MED11Q9P086 117 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 SPRR3Q9UBC9 169 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 RPH3AQ9Y2J0 694 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-227ENST00000591849 GPR45Q9Y5Y3 372 aa9.18□□□□□ -0.94
BRCA1-227ENST00000591849 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 UQCRHLA0A096LP55 91 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 AHRRA9YTQ3 701 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 C9JVG2 144 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 H3BNH8 94 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 GTPBP1O00178 669 aaKnown RBP9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ANKRD28O15084 1053 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 FADS1O60427 444 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ANP32DO95626 131 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 CLDN1O95832 211 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ANGPTL1O95841 491 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 AGR2O95994 175 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ACTL6AO96019 429 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 IGKV1D-16P01601 117 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 IL6P05231 212 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 PGRP06401 933 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 BMP7P18075 431 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 HK1P19367 917 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 PTGER4P35408 488 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 AQP5P55064 265 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 DSCR4P56555 118 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-227ENST00000591849 WNT3P56703 355 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 SRYQ05066 204 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ART3Q13508 389 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 RCAN2Q14206 197 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-227ENST00000591849 DCST2Q5T1A1 773 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 C1orf185Q5T7R7 199 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-227ENST00000591849 CHMP1BQ7LBR1 199 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 C16orf62Q7Z3J2 963 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 IFNEQ86WN2 208 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ZNF614Q8N883 585 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 GATSQ8NAP1 163 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 MAELQ96JY0 434 aaKnown RBP9.17□□□□□ -0.94
BRCA1-227ENST00000591849 OR7D2Q96RA2 312 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 OR52B2Q96RD2 323 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 DMRTA2Q96SC8 542 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 TIMP4Q99727 224 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 SLC35A5Q9BS91 424 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 UBQLN3Q9H347 655 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 RMND5AQ9H871 391 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 ZIM2Q9NZV7 527 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 BTNL2Q9UIR0 455 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 FBXL2Q9UKC9 423 aa9.17□□□□□ -0.94
BRCA1-227ENST00000591849 MYO7BQ6PIF6 2116 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 H0Y3Z8 333 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 ADAM10O14672 748 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 CLDN14O95500 239 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 KRT75O95678 551 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OXSR1O95747 527 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 AK1P00568 194 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 AGAP20933 346 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 TBXA2RP21731 343 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 COL8A1P27658 744 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 MSX1P28360 303 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 HTR1EP28566 365 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 IL12AP29459 219 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 MAP3K8P41279 467 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 IDH3AP50213 366 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 CASP9P55211 416 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 NUP107P57740 925 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 RPS26P62854 115 aaKnown RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 PHC1P78364 1004 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 HPCAP84074 193 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 FLYWCH1Q4VC44 716 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 EMC4Q5J8M3 183 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 RAET1LQ5VY80 246 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 HIST2H2BCQ6DN03 193 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 VASNQ6EMK4 673 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 TNFAIP8L2Q6P589 184 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 MAVSQ7Z434 540 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 MISPQ8IVT2 679 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OR2M3Q8NG83 312 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OR5D16Q8NGK9 328 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 OR4C3Q8NH37 302 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 FAM110BQ8TC76 370 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 PHOSPHO1Q8TCT1 267 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 HOXB13Q92826 284 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
BRCA1-227ENST00000591849 ITCHQ96J02 903 aa9.16□□□□□ -0.94
BRCA1-227ENST00000591849 TEX37Q96LM6 180 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms