RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 NUDT2P50583 147 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 RBBP4Q09028 425 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 CAPRIN1Q14444 709 aaKnown RBP17.93■□□□□ 0.46
CIRBP-220ENST00000588917 PRAMEF20Q5VT98 475 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 PRAMEF8Q5VWM4 474 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 PRAMEF7Q5VXH5 474 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 SERPINA11Q86U17 422 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 MISPQ8IVT2 679 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 ZFP62Q8NB50 900 aaPredicted RBP17.93■□□□□ 0.46
CIRBP-220ENST00000588917 OR4C3Q8NH37 302 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 RNF138Q8WVD3 245 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 TMEM41AQ96HV5 264 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 OSBPL11Q9BXB4 747 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF350Q9GZX5 532 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 KAT8Q9H7Z6 458 aaKnown RBP17.93■□□□□ 0.46
CIRBP-220ENST00000588917 AGPAT4Q9NRZ5 378 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 FBXO34Q9NWN3 711 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 L3MBTL1Q9Y468 752 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 NAV2Q8IVL1 2488 aa17.93■□□□□ 0.46
CIRBP-220ENST00000588917 TNRC6AQ8NDV7 1962 aaKnown RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 A0A1W2PQD3 144 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 TTLL8A6PVC2 850 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 SORBS2O94875 1100 aaKnown RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 ELAVL4P26378 380 aaKnown RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 MTPNP58546 118 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 GPR85P60893 370 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 C17orf67Q0P5P2 114 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 GPR68Q15743 365 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 SYPL1Q16563 259 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF630Q2M218 657 aaPredicted RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 GRAMD1BQ3KR37 738 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 GCNT6Q5T4J0 391 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 DESI1Q6ICB0 168 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 FAM180AQ6UWF9 173 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 SLC30A8Q8IWU4 369 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 Q8NA96 180 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 GRHL3Q8TE85 626 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 SLC38A5Q8WUX1 472 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 NTNG2Q96CW9 530 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 FRMD6Q96NE9 622 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 CACYBPQ9HB71 228 aaKnown RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 ZFP64Q9NPA5 681 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 ARL8BQ9NVJ2 186 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 SUCOQ9UBS9 1254 aaKnown RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 MKLN1Q9UL63 735 aa17.92■□□□□ 0.46
CIRBP-220ENST00000588917 NUP214P35658 2090 aaPredicted RBP17.92■□□□□ 0.46
CIRBP-220ENST00000588917 CYSRT1A8MQ03 144 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 ALG1L2C9J202 215 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 ACOT7O00154 380 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 FXYD1O00168 92 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 FCMRO60667 390 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 TRIM3O75382 744 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-220ENST00000588917 H6PDO95479 791 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 OXSR1O95747 527 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-220ENST00000588917 CALB2P22676 271 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 SLC6A2P23975 617 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 DCTP40126 519 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 MASP1P48740 699 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 DNASE1L1P49184 302 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 PLGLB1Q02325 96 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 TLE1Q04724 770 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 CYP51A1Q16850 503 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 GALNT10Q86SR1 603 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 SLC22A16Q86VW1 577 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF619Q8N2I2 560 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 ANKFN1Q8N957 763 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 OR1J4Q8NGS1 313 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF597Q96LX8 424 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 GPATCH1Q9BRR8 931 aaKnown RBP17.91■□□□□ 0.46
CIRBP-220ENST00000588917 IKZF5Q9H5V7 419 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 PROK2Q9HC23 129 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 BCL2L10Q9HD36 194 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 DEPPQ9NTK1 212 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 B4GALT7Q9UBV7 327 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 BSNQ9UPA5 3926 aa17.91■□□□□ 0.46
CIRBP-220ENST00000588917 PRAMEF27A3QJZ7 478 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 NDUFB5O43674 189 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 CBR3O75828 277 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 ARAFP10398 606 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 MXRA7P84157 204 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 CDK6Q00534 326 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 CHRNEQ04844 493 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF141Q15928 474 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 HYAL4Q2M3T9 481 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 KLHL26Q53HC5 615 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 TYW3Q6IPR3 259 aaKnown RBP17.9■□□□□ 0.46
CIRBP-220ENST00000588917 REEP3Q6NUK4 255 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 BNC2Q6ZN30 1099 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-220ENST00000588917 CISD2Q8N5K1 135 aaKnown RBP17.9■□□□□ 0.46
CIRBP-220ENST00000588917 C11orf65Q8NCR3 313 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 OR10A6Q8NH74 314 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 JSRP1Q96MG2 331 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-220ENST00000588917 SLC39A3Q9BRY0 314 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 LUZP4Q9P127 313 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 ZNF232Q9UNY5 417 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 DTNAQ9Y4J8 743 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 WIF1Q9Y5W5 379 aa17.9■□□□□ 0.46
CIRBP-220ENST00000588917 CCT8L1PA6NM43 557 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 NPIPB9F8W1W9 429 aa17.89■□□□□ 0.45
CIRBP-220ENST00000588917 G3V3Y1 287 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms