RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
IFT20-216ENST00000588477 IGHV4-30-2A0A087WSY4 118 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 STX16-NPEPL1H3BU86 382 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 PPP6CO00743 305 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 STX16O14662 325 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TNFSF11O14788 317 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 GCM2O75603 506 aaPredicted RBP13.61□□□□□ -0.23
IFT20-216ENST00000588477 NTN1O95631 604 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 ANGPTL1O95841 491 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 CD8AP01732 235 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TUBBP07437 444 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TSPAN8P19075 237 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TYK2P29597 1187 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 AGTR1P30556 359 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 MPIP34949 423 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 BSPH1Q075Z2 132 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 NAB1Q13506 487 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TMEM249Q2WGJ8 235 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 LETMD1Q6P1Q0 360 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 DNAJC14Q6Y2X3 702 aaPredicted RBP13.61□□□□□ -0.23
IFT20-216ENST00000588477 GALNT10Q86SR1 603 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 WDR75Q8IWA0 830 aaKnown RBP13.61□□□□□ -0.23
IFT20-216ENST00000588477 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
IFT20-216ENST00000588477 CEP112Q8N8E3 955 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 SLC9A6Q92581 669 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 ADGRG7Q96K78 797 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 NPAS1Q99742 590 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
IFT20-216ENST00000588477 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 TBL1XR1Q9BZK7 514 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 VPS11Q9H270 941 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 SLC35C2Q9NQQ7 365 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 VPS29Q9UBQ0 182 aa13.61□□□□□ -0.23
IFT20-216ENST00000588477 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 FAM234BA2RU67 622 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 COQ9O75208 318 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 IL33O95760 270 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 FESP07332 822 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 PTNP21246 168 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 IL32P24001 234 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 ADH6P28332 368 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 MAGEA4P43358 317 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 CDH13P55290 713 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 SRSF2Q01130 221 aaKnown RBP13.6□□□□□ -0.23
IFT20-216ENST00000588477 UAP1Q16222 522 aaPredicted RBP13.6□□□□□ -0.23
IFT20-216ENST00000588477 SFRP5Q5T4F7 317 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 APOOLQ6UXV4 268 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 GABRG1Q8N1C3 465 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 ROBO4Q8WZ75 1007 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 HSD17B8Q92506 261 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 TNFRSF13CQ96RJ3 184 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 BBS4Q96RK4 519 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 TRIM2Q9C040 744 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
IFT20-216ENST00000588477 GRHL1Q9NZI5 618 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 MRTO4Q9UKD2 239 aaKnown RBP13.6□□□□□ -0.23
IFT20-216ENST00000588477 TMCO1Q9UM00 188 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 B3GALT5Q9Y2C3 310 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 SNX8Q9Y5X2 465 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 ANK2Q01484 3957 aa13.6□□□□□ -0.23
IFT20-216ENST00000588477 A0A096LNT2 108 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 IGLV3-32A0A0A0MS00 114 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 A0A0J9YW62 118 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 DPRXA6NFQ7 191 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 ZSCAN12O43309 604 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 PCDH7O60245 1069 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 RAMP1O60894 148 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 SMIM24O75264 130 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 OR4F21O95013 312 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 UTS2O95399 124 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 OTCP00480 354 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 RBP1P09455 135 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 ZNF17P17021 662 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 NUDT6P53370 316 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 RAC1P63000 192 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 RAE1P78406 368 aaKnown RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 CSTF3Q12996 717 aaKnown RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 HEPACAMQ14CZ8 416 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 NRF1Q16656 503 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 ESPNLQ6ZVH7 1005 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 NUFIP2Q7Z417 695 aaKnown RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 OR2V1Q8NHB1 315 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 PIWIL2Q8TC59 973 aaKnown RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 C16orf78Q8WTQ4 265 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 TMEM185BQ9H7F4 350 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 Q9N2J8 555 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 TMEM160Q9NX00 188 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 RNF14Q9UBS8 474 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 DMGDHQ9UI17 866 aaKnown RBP13.59□□□□□ -0.23
IFT20-216ENST00000588477 ZNF225Q9UK10 706 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 SAR1BQ9Y6B6 198 aa13.59□□□□□ -0.23
IFT20-216ENST00000588477 A0A087WV62 115 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms