RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 KANK2Q63ZY3 851 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 FIGNL1Q6PIW4 674 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 ZNF474Q6S9Z5 364 aaPredicted RBP12.92□□□□□ -0.34
VMP1-206ENST00000587945 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 GATSQ8NAP1 163 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 NUP43Q8NFH3 380 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 FNDC9Q8TBE3 224 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 OTUB1Q96FW1 271 aaPredicted RBP12.92□□□□□ -0.34
VMP1-206ENST00000587945 PGM2Q96G03 612 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 C16orf58Q96GQ5 468 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 FAM111AQ96PZ2 611 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 ALPK1Q96QP1 1244 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 CCT7Q99832 543 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 PIGQQ9BRB3 760 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 MECRQ9BV79 373 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 C3orf14Q9HBI5 128 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 C6orf203Q9P0P8 240 aaPredicted RBP12.92□□□□□ -0.34
VMP1-206ENST00000587945 GIMAP2Q9UG22 337 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 VDAC3Q9Y277 283 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 DNAJC15Q9Y5T4 150 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 ABCA4P78363 2273 aa12.92□□□□□ -0.34
VMP1-206ENST00000587945 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 IGLV3-32A0A0A0MS00 114 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 LSM1O15116 133 aaKnown RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 TNFRSF21O75509 655 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 OPN1LWP04000 364 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 CRHP06850 196 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 IFI6P09912 130 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 NEFHP12036 1026 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 ALDH3A1P30838 453 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 EEFSECP57772 596 aaKnown RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 ADAM8P78325 824 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 PRR5P85299 388 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 C17orf67Q0P5P2 114 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 PDE7AQ13946 482 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 PON3Q15166 354 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 DUSP5Q16690 384 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 OR2A2Q6IF42 318 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 CAMKMTQ7Z624 323 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 DDIASQ8IXT1 998 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 SLC16A11Q8NCK7 471 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 CEP70Q8NHQ1 597 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 TWIST2Q8WVJ9 160 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 HOXB13Q92826 284 aaPredicted RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 ZBED6CLQ96FA7 236 aaPredicted RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 ZNF764Q96H86 408 aaPredicted RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 WFIKKN1Q96NZ8 548 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 NPAS1Q99742 590 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 KLHDC3Q9BQ90 382 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 GSX1Q9H4S2 264 aaPredicted RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 FBXO34Q9NWN3 711 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 KLHL28Q9NXS3 571 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 SLC17A7Q9P2U7 560 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 NDRG3Q9UGV2 375 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 MID2Q9UJV3 735 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 TESMINQ9Y4I5 508 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 DOCK7Q96N67 2140 aa12.91□□□□□ -0.34
VMP1-206ENST00000587945 HRNRQ86YZ3 2850 aaPredicted RBP12.91□□□□□ -0.34
VMP1-206ENST00000587945 MPDZO75970 2070 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 TTC36A6NLP5 189 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 PIP5K1BO14986 540 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 SIAH2O43255 324 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 TBX19O60806 448 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 SPAG7O75391 227 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 AQP8O94778 261 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 KCNK2O95069 426 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 OXSR1O95747 527 aaPredicted RBP12.9□□□□□ -0.34
VMP1-206ENST00000587945 CHEK2O96017 543 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 BCKDHAP12694 445 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 CD79BP40259 229 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 FRKP42685 505 aaPredicted RBP12.9□□□□□ -0.34
VMP1-206ENST00000587945 SLC6A8P48029 635 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 TMEM44Q2T9K0 475 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 GLYR1Q49A26 553 aaPredicted RBP12.9□□□□□ -0.34
VMP1-206ENST00000587945 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 ARL13AQ5H913 290 aaPredicted RBP12.9□□□□□ -0.34
VMP1-206ENST00000587945 PPP4R4Q6NUP7 873 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 RNF165Q6ZSG1 346 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 ZCCHC23Q6ZST2 131 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 GGNQ86UU5 652 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 METTL25Q8N6Q8 603 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 BANPQ8N9N5 519 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 CDRT4Q8N9R6 151 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 WFDC11Q8NEX6 87 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 ZFP28Q8NHY6 868 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 NUDT8Q8WV74 236 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 APOPT1Q96IL0 206 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 TRMOQ9BU70 441 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 IQCGQ9H095 443 aaKnown RBP12.9□□□□□ -0.34
VMP1-206ENST00000587945 RNF122Q9H9V4 155 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 NTMQ9P121 344 aa12.9□□□□□ -0.34
VMP1-206ENST00000587945 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms