RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	SLITRK5	O94991	958 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	IGKV1D-16	P01601	117 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	OPN1LW	P04000	364 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	MYL2	P10916	166 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	LOX	P28300	417 aa	Predicted RBP	13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	GABRA3	P34903	492 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	GPC1	P35052	558 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	SLC6A8	P48029	635 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	PSMD4	P55036	377 aa	Known RBP	13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	APOOL	Q6UXV4	268 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	ZNF551	Q7Z340	670 aa	Predicted RBP	13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	GGN	Q86UU5	652 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	EXOC3L1	Q86VI1	746 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	LCA5	Q86VQ0	697 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	METTL25	Q8N6Q8	603 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	MARK4	Q96L34	752 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	C3orf14	Q9HBI5	128 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	SIRT5	Q9NXA8	310 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	EMCN	Q9ULC0	261 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	AP4B1	Q9Y6B7	739 aa		13.6	□□□□□ -0.23
SREBF1-222	ENST00000583732	SERTM1	A2A2V5	107 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732		G3V2L1	256 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	LINC01387	J3KSC0	135 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	KCNH1	O95259	989 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PLG	P00747	810 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	GSTA1	P08263	222 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	FCGR2A	P12318	317 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	TBXA2R	P21731	343 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PCYT1A	P49585	367 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PRKAG1	P54619	331 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	C17orf67	Q0P5P2	114 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	FGFBP1	Q14512	234 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	GUSBP1	Q15486	140 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	NOXRED1	Q6NXP6	359 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	C20orf204	Q6ZNR8	217 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	FAM214B	Q7L5A3	538 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	CEP112	Q8N8E3	955 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	MNS1	Q8NEH6	495 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PPP1R14C	Q8TAE6	165 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	GPR151	Q8TDV0	419 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	EGLN2	Q96KS0	407 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	NPAS1	Q99742	590 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	TNFRSF12A	Q9NP84	129 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	EMC9	Q9Y3B6	208 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	PTGDR2	Q9Y5Y4	395 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	DNHD1	Q96M86	4753 aa		13.59	□□□□□ -0.23
SREBF1-222	ENST00000583732	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	PDPK1	O15530	556 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	RSL1D1	O76021	490 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	THBD	P07204	575 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	CTBP2	P56545	445 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	GLYR1	Q49A26	553 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	GLE1	Q53GS7	698 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	CLEC6A	Q6EIG7	209 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	ALKBH2	Q6NS38	261 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZYG11A	Q6WRX3	759 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	WFDC8	Q8IUA0	241 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	OR10D3	Q8NH80	312 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	ACMSD	Q8TDX5	336 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	OTUB1	Q96FW1	271 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	BDH2	Q9BUT1	245 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	TMEM185B	Q9H7F4	350 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	TAS2R7	Q9NYW3	318 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732	FIS1	Q9Y3D6	152 aa		13.58	□□□□□ -0.24
SREBF1-222	ENST00000583732		A0A1W2PPM1	405 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	AKAP10	O43572	662 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	CXCL13	O43927	109 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	GLRA3	O75311	464 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	SEC22B	O75396	215 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	OXSR1	O95747	527 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	PLAU	P00749	431 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	ACP2	P11117	423 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	PRPS2	P11908	318 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	PTH2R	P49190	550 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	PRR5	P85299	388 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	TMEM44	Q2T9K0	475 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZNF385B	Q569K4	471 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	CFAP157	Q5JU67	520 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	FIGNL1	Q6PIW4	674 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	FRMD7	Q6ZUT3	714 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	IKBIP	Q70UQ0	350 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	TRIM46	Q7Z4K8	759 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	CCDC63	Q8NA47	563 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	NUP43	Q8NFH3	380 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	OR6K3	Q8NGY3	331 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	CLHC1	Q8NHS4	586 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	MZB1	Q8WU39	189 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	CCDC126	Q96EE4	140 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	C12orf49	Q9H741	205 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	DCDC2	Q9UHG0	476 aa		13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	MCTS1	Q9ULC4	181 aa	Known RBP	13.57	□□□□□ -0.24
SREBF1-222	ENST00000583732	NSD1	Q96L73	2696 aa	Predicted RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms